Flac012995.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Falcaria lacertinaria
Gene Symbol
retn
Assembly
GCA_951449985.1
Location
OX602125.1:6336310-6343814[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-20 4.2e-17 62.7 0.0 15 89 50 122 39 122 0.91
2 2 5.6 1.2e+04 -2.9 0.0 25 38 251 264 213 265 0.60

Sequence Information

Coding Sequence
ATGGCACGTGGCGCGAATGGTCGCAGATCGGCCACGTCACATTTATCCACACATCAAAGGATAGTTGTATTACAGCCGCCAGTTTTGGCTGGCCTGCCCCACCCTCCCTTCTTGGTCCTATCTTGGTACAAAGCATTCAACTCGAGGTGTCAAGGGACGCCAATTAATCGGCTGCCTATAATGGCCAAGTCAGTCCTGGATCTCTACGAGTTGTACAACCTGGTGATAGCTCGCGGAGGCCTGGTGGAGGTCATTAACAAGAAGCTTTGGCAGGAGATCATCAAAGGCTTGCGTCTGCCGTCTTCCATCACGTCTGCGGCCTTCACTTTGCGCACACAatACATGAAATACTTATACGACTATGAGTGCGAGAAGAAGAACCTGTCTACTCGCAGCGAACTGGACGCGGCCATTGAAGGCAACAAGCGAGAGGGAAGACGCGCTTCTGGACAATACGACGCGCAGGCGGCGCTTGCTATGCCGCCCCTCAACCGCGGAGTGCCGGCGTCGCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTGGGCGGCGGCGTGCCGCGGTTGCCGCCGCTgccgccgcacgcgccgcaCATTTCACCACACGACCTCGAGTACCGCGTCCGCGAGTACATGAAGATGATTCAGCAACAGAGAGAGCTGATGAGAAACGGTTCGGAGTCCCCCCCGGGATCGAACGGCCCCCCGCCCATGATGTCCCCGCGCGACGCGGCGCTGAGCGCCATAGACGTGTCGCGCCTCACTCTGTGGTCCCTctacaacaacaacaacaacagccCGCAACCTGACCTCGAGCCACAGCGTGAGGCTCTGAACCTGAGCGAGAGTCCAAACTCGAGCGCGAGCGGCGGCAAGCGCGAGGCGTGTCggtcgccgccgccgcccgccaaGCGCCGCACGCCGCGCCCGCCCTCGCCGCGCGcctcgccgccgcgccgcgccgccacgCCGCCGCACCTCAACGGCGCCAACGGCGTCCACGGCGCGGCCTTCAAAATCACCACTAGAGGTGATGCCAACACAGGCGACCAGCAGCTGGTAGTGTCGATAGAACTGAACGGAGTGACGTACGAAGGCGTTCTCTTCCCCTCACAGAACGGAAACGGCCAAAACGGCCACAGGCAAATGGTATCTTAA
Protein Sequence
MARGANGRRSATSHLSTHQRIVVLQPPVLAGLPHPPFLVLSWYKAFNSRCQGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHISPHDLEYRVREYMKMIQQQRELMRNGSESPPGSNGPPPMMSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSASGGKREACRSPPPPAKRRTPRPPSPRASPPRRAATPPHLNGANGVHGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00113121; iTF_00761409; iTF_01083083; iTF_00026626; iTF_01281090; iTF_00076236; iTF_00075243; iTF_00035424; iTF_00640067; iTF_01489924; iTF_00647781; iTF_01340936; iTF_00651513; iTF_00355910; iTF_00354872; iTF_00790983; iTF_01317063; iTF_00832686; iTF_01438679; iTF_00112296; iTF_00353864; iTF_00932200; iTF_01333512; iTF_01161100; iTF_01359500; iTF_00715593; iTF_00994153; iTF_01020009; iTF_01463945; iTF_00806474; iTF_00008683; iTF_00824491; iTF_01331211; iTF_01416555; iTF_01082220; iTF_00011725; iTF_00012718; iTF_00467247; iTF_00467977; iTF_00674095; iTF_01090471; iTF_01401064; iTF_00970191; iTF_00971016; iTF_01073391; iTF_00621805; iTF_01547311; iTF_00007792; iTF_00236432; iTF_01202257; iTF_00197906; iTF_01545547; iTF_00357202; iTF_00006867; iTF_00162291; iTF_01041523; iTF_00796308; iTF_01560916; iTF_00736405; iTF_01282006; iTF_01279050; iTF_01415606; iTF_01451254; iTF_01453062; iTF_01452121; iTF_01016352; iTF_00276055; iTF_01437751; iTF_00009785; iTF_00364697; iTF_01443617; iTF_00407351; iTF_00406493; iTF_01018361; iTF_01017523; iTF_01081369; iTF_00278898; iTF_00006076; iTF_01502754; iTF_01503633; iTF_00681450; iTF_00683108; iTF_00382354; iTF_00284312; iTF_00034490; iTF_00114715; iTF_00673277; iTF_00795483; iTF_00874235; iTF_00875087; iTF_00875936; iTF_00421133; iTF_00420329; iTF_00896557; iTF_00212211; iTF_00213202; iTF_01181689; iTF_01367483; iTF_00878653; iTF_01204655; iTF_01203030; iTF_01071418; iTF_01079677; iTF_01222269; iTF_01124383; iTF_01279970; iTF_01334539; iTF_01125229; iTF_00074263;
90% Identity
iTF_00341121; iTF_01279970; iTF_01281090; iTF_00790983; iTF_00790026; iTF_01334539; iTF_01359500; iTF_00467247; iTF_00467977; iTF_00674095; iTF_01090471; iTF_00806474; iTF_01509366; iTF_01528980; iTF_01528063; iTF_00662016; iTF_00407351; iTF_00406493;
80% Identity
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