Uoli022087.1
Basic Information
- Insect
- Udea olivalis
- Gene Symbol
- retn
- Assembly
- GCA_947369235.1
- Location
- OX376359.1:6996080-7007710[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-20 1.8e-16 61.1 0.0 16 89 30 101 22 101 0.93 2 2 9 2.2e+04 -3.3 0.0 25 38 233 246 196 247 0.68
Sequence Information
- Coding Sequence
- ATGGGCGGTCACTGTTCGCCCGCGCTGGCTGCTCATTGGCCAGCTGCGGGGTTGCGGTCGCGAAGGGCCTTGATACAACTCTCGATAAGCGGAACACCAATCAACCGGCTTCCGATCATGGCCAAGTCTGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGAGGAGGCCTGGTGGAGGTCATCAACAAGAAACTGTGGCAGGAAATTATCAAGGGTCTTCGGCTGCCGTCTTCTATCACCTCTGCTGCGTTCACCCTGCGAACACAATACATGAAATACCTGTACGATTACGAGTGCGAGAAGAAAAACCTGTCTACACGGAGCGAGCTGGACGCGGCAATTGAGGGCAACAAGCGGGAGGGCAGACGCGCCTCCGGCCAGTACGATGCGCAGGCGGCACTTGCAATGCCACCGCTGAGCCGTGGGGTGCCAGCGTCGCTTGCACAGCTCTCTCAACACATGCAGCCTCTCTCACTCTCCTTAGGGGGTGTAGGAGGAGTTCCCCGTCTACCGCCCCTTCCACCACACGCACCGCACATCTCGCAACACGACATCGAGTACCGCGTGCGGGAGTATATGAAGATGATACAACAGCAGCGGGAGCTGATGAGAAATGGATCAGAGTCGCCTCCAGGGTCGAACGGGCCCGCTCCCATAATGTCACCGCGTGATGCAGCTGCCCTGAGCGCCATCGACGTGTCCCGCCTCACACTCTGGTCTCTCTACAACAACAACAACAACAGCCCGCAGCCAGACCTGGAGCCACAACGGGAGGCACTAAACCTTAGCGAGAGTCCAAACTCGAGCACAAGCGGAGGCAAGCGCGAAGCGTGTCGCTCCCCGCTGCCGCCCGCGAAGCGCCGCACGCCGCGCCCGCCCTCCCCCCGCGCGCCCTCCCCGCCGCGCTGCAACCCGCCGCAGCAGCAGCTCAACGGCAGTCCACCTTTGAACGGAGTCAACGGAGCTGCCTTCAAAATCACAACGAGAGGTGACGCAAATACAGGAGACCAGCAACTGGTCGTATCAATAGAACTCAACGGAGTCACATACGAGGGCGTATTATTCCCTTCGCAAAATGGAAACGGGCAAAACGGTCACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MGGHCSPALAAHWPAAGLRSRRALIQLSISGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPLPPAKRRTPRPPSPRAPSPPRCNPPQQQLNGSPPLNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00858329;
- 80% Identity
- -