Pnig019487.1
Basic Information
- Insect
- Pyrausta nigrata
- Gene Symbol
- retn
- Assembly
- GCA_949316185.1
- Location
- OX438951.1:11336934-11345716[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-20 2.3e-16 60.9 0.0 16 89 70 141 50 141 0.94
Sequence Information
- Coding Sequence
- ATGGAGTTCCTATTAAAAAGTGTCCAGGAGTTAAATATGCGAAGTCGAAAAGAAGGCCCATTCCACCATAATGAGCATTCGGCCAACTGGCTAGGATCAACGCCCCTGCTAACGAGGTCTGCTGGATTATCTTACGTCTGCACATACAGCCAACTCCATTTATCTGTAGAAGGAAGGACCAATGTTGCGGACTGTATTAATTATGATGATGGAACTCCCATCAACCGGCTGCCCATCATGGCTAAGTCAGTCCTGGATCTGTACGAGCTGTATAACCTGGTGATAGCGAGAGGCGGTCTCGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGGTTAAGGCTGCCATCCTCCATCACCTCTGCGGCTTTCACGCTACGGACACAATACATGAAGTACCTGTACGACTACGAATGTGAGAAGAAGAACCTATCCACCAGGAGTGAGCTGGACGCGGCCATAGAGGGAAACAAGAGAGAGGGCAGACGCGCGTCGGGCCAGTACGATGCGCAGGCGGCTCTAGCGATGCCGCCTCTCAGCCGTGGCGTGCCGGCGTCTCTCGCTCAGCTGTCACAGCACATGCAACCTCTCTCCCTCTCGCTCGGAGGGGGCGTGGGGGGAGTGCCACGCTTGCCCCCCTTACCGCCGCACGCGCCGCATATCTCGCAACACGATATCGAGTATCGCGTGAGAGAATACATGAAGATGATTCAGCAACAGAGAGAGCTAATGAGAAATGGTTCGGAATCCCCTCCAGGGTCGAACGGGCCAGCACCCATAATGTCGCCGCGCGACGCCGCCGCTCTTAGTGCCATAGACGTATCACGCCTCACCCTCTGGTCTCtttacaacaacaacaacaacaacagcagcCCGCAGCCGGAGTTAGAGCCGCAACGCGAGGCCCTCAACCTCAGCGAGAGTCCAAACTCAAGCCTTAGTGGTGGCAAGCGCGAGGCCTGCCGCTCCCCCCCGCCCCCCGCGAAGCGCCGCACCCCGCGCCCACCCTCTCCTCGCGTGGCAACTCCCCCGCGCGTCACCCCCCCGACACAGGTTAACGGCAGTCCGCCGACTAACGGCGTCAATGGAGCTGCCTTCAAGATTACTACTCGAGgTGACGCAAGCACAGGTGACCAGCAACTAGTCGTGTCCATAGAACTCAACGGCGTCACATACGAAGGTGTGCTATTTCCATCGCAGAGCGGGAACGGACAAAACGGCCACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MEFLLKSVQELNMRSRKEGPFHHNEHSANWLGSTPLLTRSAGLSYVCTYSQLHLSVEGRTNVADCINYDDGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSSPQPELEPQREALNLSESPNSSLSGGKREACRSPPPPAKRRTPRPPSPRVATPPRVTPPTQVNGSPPTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00723754;
- 80% Identity
- -