Xdes018936.1
Basic Information
- Insect
- Xanthorhoe designata
- Gene Symbol
- retn
- Assembly
- GCA_963582015.1
- Location
- OY757049.1:3820272-3832590[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-20 1.1e-16 61.6 0.0 16 89 94 165 90 165 0.95
Sequence Information
- Coding Sequence
- ATGATCTGGCGTAGTTGCGTCGCCTTTCAGCCGCATCCGACATTTCCATTGTTGGCATTTTATAGCCGGTGTTACAGTCCCAGCGGTGATCGTAAACTACGCAACGGCTTTCGATACTATCCAGGGAGATCTACCGATGCCGTGGCTGATGGGATGCGCGACCGCAGCGCGCGCGTTATCTCACTCAGCCACCGCAACCGATTGTCATTCGTTTCTAATAAATTGATACGAGGCGCGGAGCCGCGGGAACGCGGCCGGCCGATTGGTCGAGGCGTTCCCCGAGGAACTCCAATAAATCGGCTGCCGATAATGGCCAAGTCAGTGTTGGACCTCTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGCCTGGTGGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATTAAAGGTCTCCGGCTGCCGTCTTCAATTACTTCTGCGGCCTTCACGCTTCGCACACAATACATGAAATACCTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCCACTCGCAGCGAGCTGGACGCAGCCATCGAAGGCAACAAGCGGGAAGGCAGGCGCGCCTCGGGGCAATACGACGCTCAAGCTGCACTCGGCATGCCGCCTCTGAACCGCGGGGTGCCAGCCTCGCTCGCACAGCTGTCACAGCATATGCAGCCTCTCTCTCTCTCGCTCGGAGGGGGGGTGCCCCGCCTGCCCCCGCTGCCCCCGCACGCCCCGCATATCTCACAACATGACATAGAGTACAGAGTGAGGGAGTACATGAAGATGATACAGACACAACGGGAACTGATGAGAAATGGATCAGAATCCCCGCCCAGCGCGAACGGGCCCGCGTCCATGATGTCTCCCCGCGACGCCGCCGCGCTCAGCGCCATCGACGTCTCCCGCCTCACGCTCTGGTCTCtctacaacaacaacaataacaacAGCCCCGCCGATCTGGAGCCACAACGTGAGGCACTAAACCTCAGTGAGAGTCCAAACTCGAGCACGAGCGGTGGCAAGCGCGAGGCTTGCCGCTCGCCCCCTCCGCCCGCGAAGCGCCGCACCCCGCTCCCCCCCTCGCCGCGACTGCCCTCCCCCCCGCGACTGGCCTGCGCGCCCGCACCCGCACAGATGAATGGAGGCACAACTAACGGAACAAATGGAGCTGCCTTCAAGATTACCACTAGAGGTGATGCCAACACAGGCGACCAGCAACTCGTCGTATCAATAGAACTGAACGGTGTTACATACGAAGGCGTCCTATTCCCCTCACAAAACGGCAACGGTCAGAACGGTCACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MIWRSCVAFQPHPTFPLLAFYSRCYSPSGDRKLRNGFRYYPGRSTDAVADGMRDRSARVISLSHRNRLSFVSNKLIRGAEPRERGRPIGRGVPRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSANGPASMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPADLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPLPPSPRLPSPPRLACAPAPAQMNGGTTNGTNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00723754;
- 80% Identity
- -