Acro013312.2
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- retn
- Assembly
- GCA_949315895.1
- Location
- OX438865.1:7126817-7135492[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-20 3.1e-16 60.8 0.0 9 89 4 82 1 82 0.91 2 2 6.3 2.2e+04 -2.8 0.0 25 38 214 227 175 228 0.58
Sequence Information
- Coding Sequence
- atggcttcgttaagtggttcaaataaagagataaGAACGCCCATAAACCGGCTGCCCATCATGGCTAAGTCAGTTCTAGACCTATACGAGCTGTACAACCTGGTTATAGCCCGTGGGGGTCTCGTCGAGGTGATAAACAAGAAACTGTGGCAGGAGATCATCAAAGGGTTGAGGCTGCCATCCTCTATCACATCGGCGGCTTTTACGCTGCGGACGCAatacATGAAGTATTTGTATGATTACGAGTGCGAGAAGAAGAACCTGTCGACCAGGAGCGAGCTGGACGCAGCAATAGAGGGCAACAAGAGAGAGGGCAGACGGGCGTCCGGCCAGTACGATGCGCAGGCGGCTCTAGCGATGCCGCCACTCAGCCGTGGTGTACCTGCATCTCTCGCGCAGCTGTCGCAGCACATGCAGCCTCTCTCCCTCTCGCTCGGCGGTGGCGTGGGCGTGCCACGCCTGCCCCCACTCCCGCCGCACGCGCCGCACATCTCACAACACGATATTGAGTATCGTGTGAGGGAGTACATGAAGATGATTCAGCAGCAGAGAGAGTTGATGAGGAATGGTTCAGAATCACCTCCATTGTCAAACGGACCAGCCCCTATAATGTCGCCGCGCGACGCCGCCGCTCTCAGTGCCATAGACGTATCACGCCTCACTCTTTGGTCTctctacaataataataacaacagtCCACAGCCGGAGTTGGAGCCACAACGcGAGGCATTAAATCTCAGTGAGAGTCCCACTTCCAGCCTCAGCGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCCCGCCCCCCGCGAAGCGTCGCACCCCGCGCCCGCCCTCGCCCCGCGCGCCGTCGCCCCCCCGCGTCACTCCGCCGGCGCAGGTCAACGGTAGCCCTCCGACAAACGGCGTCAATGGTGCTGCTTTCAAGATCACTACTCGAGGTGACGCAAGCACAGGAGACCAGCAGCTAGTCGTCTCCATAGAACTCAACGGAGTCACGTACGAGGGCGTCCTTTTTCCATCACAGAACGGGAACGGACAGAACGGCCACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MASLSGSNKEIRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPLSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPELEPQREALNLSESPTSSLSGGKREACRSPPPPAKRRTPRPPSPRAPSPPRVTPPAQVNGSPPTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -