Cpun013741.1
Basic Information
- Insect
- Cyclophora punctaria
- Gene Symbol
- retn
- Assembly
- GCA_951394245.1
- Location
- OX596183.1:6477954-6483463[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-20 1.7e-16 60.7 0.0 16 89 15 86 11 86 0.94 2 2 3.6 9.5e+03 -2.5 0.0 25 38 217 230 179 231 0.57
Sequence Information
- Coding Sequence
- ATGATTAACTGCAGACAGGAAGACGGATTGACGGATAGTCGTTTAGGTACTCCTATAAACCGACTGCCGATCATGGCCAAGTCTGTGCTTGACCTGTACGAGCTGTACAACTTGGTGATCGCCCGCGGCGGCCTCGTCGAGGTCATCAACAAGAAACTCTGGCAAGAAATCATTAAAGGACTCCGATTACCTTCCTCTATCACTTCGGCAGCTTTCACTTTACGTACCCAGTATATGAAATATCTGTATGACTATGAGTGCGAGAAGAAGAACCTTTCGACCCGTAGCGAGTTGGACGCGGCTATTGAAGGAAACAAACGGGAAGGGCGACGGGCGTCGGGACAATATGACGCTCAGGCGGCGCTCGCTATGCCCCCTCTGAACCGAGTGCCAGCGTCACTCGCCCAGCTATCCCAGCACATGCAGCCCCTGTCCCTCTCGCTGGCCGGCGGGGTGGGCGGCGTGCCCCGCCTGCCGCCCCTGCCCCCGCACGCGCCGCACATCTCGCAGCACGACATAGAGTACAGAGTCAGGGAATACATGAAGATGATACAGCAGCAACGAGAGCTGATGAGGAACGGCTCGGAGTCGCCCCCCAGCGCCAACGGGCCGACCCCCATGATGTCCCCCCGTGACGCGGCGCTCAGCGCCATCGACGTGTCCCGCCTCACGCTCTGGTCTCTctacaacaacaacaacaacagtCCGCAGCCCGACTTGGAGCCGCAACGCGAGGCCTTGAACCTGAGTGAGAGCCCGAACTCGAGCGGCAGCGGCGGCAAGCGCGAGGCGTGCCGCGACTCGTgccgctcgccgccgccgcccgccaaGCGCCGCACGCCGCGCCCGCCCTCGCCGCGCGCCGacccgccgcgcgcgccgcgccccaACGGGGACGCGCCCCAACCCGCGCACGGCGCCGCCTTCAAGATCACCACTAGAGgtGACGCGACAACAGGTGACCAGCAACTGGTAGTCTCAATAGAACTGAACGGAGTCACATACGAAGGAGTCCTCTTCCCTTCACAAAGCGGCAACGGACAAAACGGGCACAGGCAAATGGTCTCCTAA
- Protein Sequence
- MINCRQEDGLTDSRLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLAGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPSANGPTPMMSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSGSGGKREACRDSCRSPPPPAKRRTPRPPSPRADPPRAPRPNGDAPQPAHGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00723754;
- 80% Identity
- -