Agen007985.2
Basic Information
- Insect
- Agriphila geniculea
- Gene Symbol
- retn
- Assembly
- GCA_943789515.1
- Location
- CALSUL010000095.1:967750-975519[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-20 4e-16 60.9 0.0 16 89 15 86 10 86 0.94 2 2 7.3 3.9e+04 -3.1 0.0 25 38 214 227 176 228 0.66
Sequence Information
- Coding Sequence
- ATGATTAACTACAGACAGGAAGACGGATTGACAAATAGTCGTTTAGGCACTCCCATCAACAGACTCCCGATCATGGCCAAGTCTGTGCTGGACCTATATGAGCTGTACAACTTGGTGATCGCACGCGGGGGCCTCGTGGAGGTCATCAACAAGAAACTGTGGCAAGAGATCATTAAGGGTCTTAGGCTGCCGTCGTCTATCACATCTGCTGCTTTTACACTCCGCACACAGTACATGAAATACCTGTATGACTACGAATGCGAGAAGAAGAACCTGTCAACCAGAAGTGAGCTGGATGCAGCTATAGAAGGCAACAAGAGGGAGGGCAGGCGCGCCTCAGGCCAGTACGACGCGCAAGCGGCTCTAGCTATGCCCCCCCTGAACCGCGTGCCAGCGTCACTCGCGCAGCTGTCCCAGCACATGCAGCCGTTGTCCCTCTCGCTGGGGGGCGTGCCCCGACTCCCTCCCCTACCGCCGCACGCGCCACACATCTCGCAGCACGATATTGAGTACCGCGTGCGGGAGTACATGAAGATGATACAGCAGCAACGGGAGCTGATGAGAAACGGTTCCGAATCGCCCCCAGGGTCGAACGGCCCGGCCCCTATAATGTCGCCCCGCGACGCGGCCGCACTCAGCGCCATCGACGTGTCCCGCCTGACTCTCTGGTCCctctacaacaacaacaacaacagcccCCAGCCCGAGCTGGAGCCACAACGCGAGGCTCTAAACCTCAGTGAGAGCCCCAACTCCAGCACGAGTGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCCCGCCGCCCGCCAAGCGGCGCACCCCGCGGCCGCCCTCGCCGCGCGCGCCCTCCCCCCCGCGCTGCCCGCCGCCCGCGCAAGTCAACGGCAACGGACCGGCGAGTAGCGTCAATGGAGCCGCTTTCAAGATCACAACTAGAGGTGATGCAACCACAGGCGACCAGCAACTAGTCGTCTCAATAGAACTGAACGGTGTCACATACGAGGGTGTTTTATTCCCATCACAGAGTGGGAACGGACAGAACGGCCACAATAGACAAATGGTGTCTTAA
- Protein Sequence
- MINYRQEDGLTNSRLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPELEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRAPSPPRCPPPAQVNGNGPASSVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQSGNGQNGHNRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -