Ahor026938.2
Basic Information
- Insect
- Anania hortulata
- Gene Symbol
- retn
- Assembly
- GCA_963576865.1
- Location
- OY756407.1:6852910-6868453[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-20 1.6e-16 61.5 0.0 16 89 13 84 5 84 0.94 2 2 9.2 2.4e+04 -3.1 0.0 25 38 217 230 179 231 0.66
Sequence Information
- Coding Sequence
- ATGTTGCTTTGTCCTATTGCAGCTAGCGTTGCTTTTAATGGAACCCCAATAAACCGGCTACCCATTATGGCTAAGTCAGTTCTAGACCTGTACGAGTTATACAACCTGGTCATAGCCCGCGGGGGACTCGTCGAGGTGATAAACAAGAAACTTTGGCAGGAGATCATCAAAGGGTTGAGGCTCCCGTCCTCCATCACATCTGCAGCTTTCACGTTGCGAACGCAatACATGAAGTACTTGTATGACTACGAGTGCGAGAAGAAGAACCTGTCGACCAGGAGCGAGCTGGACGCGGCAATAGAAGGGAACAAGAGAGAGGGCAGGCGAGCGTCCGGCCAATACGATGCGCAGGCGGCTCTAGCGATGCCGCCGCTCAGCCGTGGCGTACCCGCGTCTCTCGCGCAGCTCTCGCAACACATGCAGCCTCTCTCCCTCTCGCTCGGCGGAGGCGTGGGCGGCGTGCCACGCCTGCCCCCACTCCCGCCGCACGCGCCGCACATCTCACAACACGATATTGAGTACCGTGTGAGAGAGTACATGAAGATGATACAGCAGCAGAGGGAGTTGATGAGGAATGGTTCAGAATCTCCTCCAGGTTCAAACGGACCAGCGCCTATAATGTCGCCGCGCGATGCCGCCGCTCTCAGTGCCATAGACGTTTCACGCCTCACCCTCTGGTCTCTCTACAACAATAACAACAACAGCCCGCAGCCGGAATTAGAGCCACAGCGCGAGGCATTAAACCTCAGTGAGAGTCCAACCTCTAGCCTCAGCGGTGGCAAGCGCGAGGCCTGCCGTTCACCCCCGCCTCCCGCGAAGCGCCGCACCCCGCGCCCTCCGTCGCCCCGCGTGCCTTCGCCCCCGCGCGTCACCCCGCCGGCACAGGTCAACGGCAGTCCTCCGACAAATGGCGTCAATGGGGCTGCTTTCAAGATCACTACTCGAgGTGATGCAAGCACAGGCGACCAGCAGCTCGTCGTGTCCATAGAACTCAATGGAGTCACGTACGAAGGCGTGCTCTTTCCATCACAGAACGGGAACGGACAGAACGGCCACAGGCAAATGGTATCTTAA
- Protein Sequence
- MLLCPIAASVAFNGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPELEPQREALNLSESPTSSLSGGKREACRSPPPPAKRRTPRPPSPRVPSPPRVTPPAQVNGSPPTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -