Agoe090840.2
Basic Information
- Insect
- Argyresthia goedartella
- Gene Symbol
- retn
- Assembly
- GCA_949825045.1
- Location
- OX463827.1:12665384-12676698[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-19 4.4e-15 58.6 0.0 18 89 17 86 9 86 0.93
Sequence Information
- Coding Sequence
- ATGCGAAAATATCCTGTATGTGGCCAGAAGAAATGTGGCTGCAGCTGGACGCCCATCAACAGGCTGCCAATAATGGCCAAGTCCGTGCTGGACCTGTACGAGCTGTACAACCTGGTAATCGCTCGCGGCGGCCTCGTGGAGGTGATCAACAAGAAGCTGTGGCAAGAGATCATCAAGGGGCTGCGGCTGCCGTCCTCCATCACGTCGGCGGCGTTCACGCTGCGGACGCAGTACATGAAGTACCTGTACGACTACGAGTGCGAGAAGAAGAACTTGTCGACCCGCAGCGAGCTGGACGCCGCCATCGAGGGGAACAAGCGCGAAGGGCGCAGGGCATCCGGCCAGTACGACGCGCAGGCAGCTCTGGCTATGCCCCAGCTGTCCCGCGGAGTTCCTGCCTCGCTCGCGCAACTGTCCCAGCACATGCAGCCTCTCTCGCTCTCTCTCGGAGGGGGGGTGCCCCGCCTGCCCCCCCTGCCCCCTCACGCACCCCACATGGCCCCCCACGAGCTGGAGTACCGCGTGAGAGAGTATATGAAGCTCATTCAGCAGCAGCAGAGGGATTTTAGGAGAAATGGTTCGGAATCCCCGCCCTCGTCCGGCAACGGACCCACAGTGATGTCCCCCCGAGACGCCGCGCTGTCGGCACTCGACGTGTCCCGCCTGACGCTGTGGTCGCtgtacaacaacaataacaacaactcGCCGCAACCGGACCCGGAGCCGCAACGCGAGGCTCTCAACCTCAGTGAGAGTCCGTCCAGCATATGCGTGAAGCGCGAGGCGTGCCGCTCGCCCCCGCCCCCTGCCAAGCGCCGCACGCCGCGCCCCGCGTCGCCCCGCGCCCCctccccgccgccgccgcgcgcgCCTAGTGGCGCCCCCGTTAATGGCGCTAATGGGGCAGCGTTCAAGATTACTACGAGAGGCGACGCCAGCACTGGCGACCAGCAGCTGGTAGTCTCAATCGAGCTCAACGGCGTCACGTACGAAGGTGTGCTGTTCCCTTCCTCACAGAATGCCAACTCACCGACCACACAACACAGGCCCATGGTCACTTAG
- Protein Sequence
- MRKYPVCGQKKCGCSWTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPQLSRGVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHMAPHELEYRVREYMKLIQQQQRDFRRNGSESPPSSGNGPTVMSPRDAALSALDVSRLTLWSLYNNNNNNSPQPDPEPQREALNLSESPSSICVKREACRSPPPPAKRRTPRPASPRAPSPPPPRAPSGAPVNGANGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSSQNANSPTTQHRPMVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_01545547;
- 80% Identity
- -