Zhep008427.2
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- retn
- Assembly
- GCA_949319315.1
- Location
- OX439382.1:25325824-25335952[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-19 3e-16 60.0 0.0 17 89 31 101 15 101 0.88
Sequence Information
- Coding Sequence
- ATGCGACGCGATTTACCACGCTCACTGGGTTTACTGCCGCTGCTGGGTTTTATGGCTTCATATCGAGTGCTGCTCGTGCTAGGAGGAGCAAGCACACCAATAAACCGGCTACCGATCATGGCGAAGTCGGTCCTGGACCTGTACGAGCTGTACAACCTGGTGATAGCCCGCGGCGGCCTGGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGAGGCTGCCGTCGTCCATCACCTCCGCTGCCTTTACGCTAAGGACACAATACATGAAGTACTTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCTACTCGCAGCGAGTTGGACGCGGCCATCGAAGGGAACAAGCGGGAGGGACGGCGCGCCTCGGGGCAGTACGATGCGCAGGCGGCGCTAGCTATGCCACCAATGAACCGCGGCGTGCCAGCCTCCCTGGCCCAGTTGACCCAGCACATGCAGCCTCTATCGCTCTCACTGGGAGGGGGAGTTGGGGGAGTCCCTAGACTGCCTCCCCTGCCCCCCCACGCGCCCCACATGGCCCCCCATGAGCTGGAGTACAGAGTTCGGGAGTACATGAAGTTAATACAGCAGCAGCAAAGGGATTTTAGAAGGAATGGTTCGGAGTCCCCCCCTAGCAGCAACGGCCCCCCCTCGGGTGTGATGTCGCCGCGAGACGCTGCACTTTCTGCACTCGACGTATCGCGCCTTACACTCTGGTCACTctacaataacaacaacaacaactcgcCACAGCCTGATTTGGAGCCACAACGCGAGGCCCTAAACCTCAGTGAGAGTCCGAATTCCAGCATATGCGTGAAGCGCGAGGCCTGCCGCTCCCCCCCTCCGCCGGCGAAGCGGCGCACCCCCCGCCCGCCCTCGCCCCGCGCGCCCTCGCCCGCCCCGCGGACGCCCAGCCAGCCGGTCAACGGAGCGCATGGGGCCGCCTTCAAGATCACTACTAGAGGCGATGCCAACACAGGCGACCAACAGCTGGTTGTATCGATAGAGCTCAACGGAGTGACATACGAAGGAGTCCTGTTCCCCTCATCGCAAAACGGCAGCTCACCCACCACACACCATAGGCCCATGGTCTCCTAG
- Protein Sequence
- MRRDLPRSLGLLPLLGFMASYRVLLVLGGASTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPMNRGVPASLAQLTQHMQPLSLSLGGGVGGVPRLPPLPPHAPHMAPHELEYRVREYMKLIQQQQRDFRRNGSESPPSSNGPPSGVMSPRDAALSALDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSICVKREACRSPPPPAKRRTPRPPSPRAPSPAPRTPSQPVNGAHGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSSQNGSSPTTHHRPMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_01545547;
- 80% Identity
- -