Cgly018623.1
Basic Information
- Insect
- Coenonympha glycerion
- Gene Symbol
- retn
- Assembly
- GCA_963855885.1
- Location
- OY979646.1:5909948-5918335[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-17 1.5e-13 51.6 0.1 29 89 4 62 1 62 0.93 2 2 2.9 9e+03 -2.2 0.0 25 38 179 202 153 204 0.53
Sequence Information
- Coding Sequence
- ATGGCGAAGTCGGTGCTAGATCTGTACGAGCTGTACAACCTGGTGATCGCTCGCGGTGGTCTGGTGGAAGTCATCAACAAGAAACTCTGGCAGGAGATCATCAAGGGTCTGCGGCTGCCTTCCTCCATCACCTCGGCCGCCTTCACTTTACGCACACAATACATGAAGTACCTGTACGACTACGAGTGCGACAAGAAGAACCTGTCGACGAGGAGTGAACTGGACGCCGCGATAGAGGGCAACAAGCGCGAGGGTCGCCGCGCCTCGGGCCAGTACGACGCGCAGGCTGCTTTGGCCATGCCACCCCTAAGCCGAGTGCCGGCGTCACTCGCGCAGCTGTCGCAGCACATGGCGCCGCTGTCGCTGTCGCTGGGCGGCGCGGTGGCGGGGATGCCCCGCctgccgccgctgccgccgcacgcgccgcacgtgTCGCAGCACGACATCGAGTACCGCGTGCGCGAGTACATGAAGATGATCCAGCAGCAGCGCGAGCTCATCCGGAACGGATCGGAGTCACCCCCCAGTGCTCCGATGGTGTCCCCGCGTGACGCTGCGCTGTCGGCCATCGACGTGTCGCGCCTCACGCTCTGGTCCCtgtacaacaacaacaacaacagccCGCAACCAGACCTCGAGCCACAGCGTGAGGCCCTTAATCTGAGCGAGAGCCCGAACTCGAGTTTGAGCGGCAAACGGGAAGCGTGccgctcgccgccgccgcccgccaagcgccgcacgccgcgcccgccgtcCCCTGCGCCCGCACCGTCGCCGCGCGAGCCCTCGCCGCGCACGCACGCGCACCTCAACGGCGGCGCCAACGGCGTGCACGGGGCCGCCTTCAAAATCACCACGAGAGGTGACGCAAACACAGGCGACCAACAGCTCGTCGTGTCAATCGAACTGAACGGCGTGACGTACGAGGGTGTGCTCTTCCCATCACAAAATGGCAGCGGTCAAAATAATCATCGGCAAATGGTCTCTTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECDKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRVPASLAQLSQHMAPLSLSLGGAVAGMPRLPPLPPHAPHVSQHDIEYRVREYMKMIQQQRELIRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLSGKREACRSPPPPAKRRTPRPPSPAPAPSPREPSPRTHAHLNGGANGVHGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGSGQNNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00642129;
- 80% Identity
- -