Lmon025530.1
Basic Information
- Insect
- Lymantria monacha
- Gene Symbol
- retn
- Assembly
- GCA_905163515.1
- Location
- LR991098.1:20926190-20939676[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 4.5e-16 60.2 0.0 17 89 5 75 1 75 0.95 2 2 5 1.9e+04 -2.7 0.0 25 37 204 216 163 218 0.57
Sequence Information
- Coding Sequence
- ATGGGAATAATTGGCACACCTATCAACCGGCTGCCGATAATGGCTAAGTCTGTCCTAGATCTCTACGAGTTGTACAACTTGGTAATCGCTCGCGGGGGACTCGTCGAAGTAATCAACAAGAAGCTTTGGCAAGAAATCATCAAAGGTTTAAGATTGCCATCGTCTATTACATCAGCTGCATTCACACTACGTACACAATACATGAAGTATCTGTACGATTATGAATGCGAGAAGAAGAATCTGTCAACTCGGAGCGAGTTGGATGCTGCCATTGAAGGCAACAAGCGTGAGGGAAGACGTGCCTCTGGACAATATGATGCACAAGCTGCTTTAGCTATGCCGCAATTGAATCGCGTGGTGCCAGGTACATTGGCGCAGTTGTCACAACACATGCAACCGTTGTCATTGTCACTTGGTGGTGCACCACGTTTACCGCCACTACCACCCCACGCATCACATCTCGCTCAACATGACCTCGAATATAGAGTACGCGAATATATGAAAATGATACAACAGCAAAGGGAGATTATAAGAAATGgtTCCGAATCTCCTCCAAATGTGAATGGTCCAGCGACAATGATGTCTCCTCGCGACGCGGCTGCTCTCAGTGCCATAGATGTATCACGTCTAACATTATGGTCtttgtacaataataataataacagcagTCCACAACCTGATCTCGAACCACAGCGAGAGGCATTAAACCTGAGCGAGAGCCCGAACTCTAGCACGTGTGGGAGTAAACGCGAGGCGTGTAGATCGCCACCACCGCCAGCCAAGAGGCGCAGTTCACGGCCCACAACGCCTCGCGCCTCACCGCCTTCACCACCACTAGCAGCACCGATCCCACGCACCAGCAGGCTTAACGAAACAACATCACCTCCACCGCCCACCCTGAACGGTCCCGCTAACGGCGTCAATGGTGCCGCATTTAAAATAACCACCAGagGCGATGCCAGCACAGGCGATCAACAGTTAGTGGTCTCCATAGAACTGAACGGCGCAATATATGAAGGCGTACTCTTTCCCGCTAACAGGAATGGTCATAGAAAATAG
- Protein Sequence
- MGIIGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPQLNRVVPGTLAQLSQHMQPLSLSLGGAPRLPPLPPHASHLAQHDLEYRVREYMKMIQQQREIIRNGSESPPNVNGPATMMSPRDAAALSAIDVSRLTLWSLYNNNNNSSPQPDLEPQREALNLSESPNSSTCGSKREACRSPPPPAKRRSSRPTTPRASPPSPPLAAPIPRTSRLNETTSPPPPTLNGPANGVNGAAFKITTRGDASTGDQQLVVSIELNGAIYEGVLFPANRNGHRK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00931005;
- 80% Identity
- -