Ssim016900.1
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- retn
- Assembly
- GCA_949699795.1
- Location
- OX453071.1:7435870-7446041[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-20 1.6e-16 61.2 0.0 16 89 10 81 4 81 0.94 2 2 1.6 5.7e+03 -1.4 0.0 10 38 181 219 171 223 0.53
Sequence Information
- Coding Sequence
- ATGCCTTCAAAGGAGACTCTCCTCTTAGAAGGCACACCTATAAACCGGCTGCCGATAATGGCCAAGTCGGTGCTGGACCTGTACGAACTGTACAATTTGGTTATCGCTCGCGGCGGCCTCGTCGAGGTGATCAACAAGAAACTGTGGCAGGAGATCATCAAGGGTCTTCGTCTGCCGTCTTCAATTACATCAGCCGCCTTTACTCTACGTACACAATACATGAAGTACTTGTATGACTACGAGTGCGAGAAGAAGAACCTGTCAACCCGCAGCGAGCTAGACGCAGCTATAGAAGGCAATAAGCGGGAGGGACGGCGCGCGTCCGGCCAGTACGACGCGCAAGCTGCCTTAGCTATGCCTCCCCTGAACCGCGGTGTGCCAGCCTCCCTAGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTCGGCGGCGTGGGCGTCCCCCGTCTCCCCCCGCTGCCGCCCCACGCGCCCCACGTCACCCACGACATCGAGTACCGCGTGCGGGAGTACATGAAGATGATACAGCAACAACGCGAGCTTATGAGGAATGGGTCAGAATCTCCACCGAGCGCCCCGATGGTGTCGCCCCGCGACGCGGCGCTGTCCGCCATCGACGTGTCCCGCCTCACGTTGTGGTCGCtgtacaacaacaacaacaataacAGCCCGCAACCGGACCTCGAGCCGCAACGCGAGGCTTTAAACCTAAGCGAGAGCCCGAACTCGAGCGCGAGCGGCGGCAAGCGCGAGGCGTGCcgctcgccgccgccgcccgccaaGCGGCGCACGCCGCGCCCGCCGtcgccgccgcgctcgccgccgcgcgccgcgccgccgccgccgccacacGTCGCCAACGCGAACGGTGTTAATGGGGCCGCTTTCAAGATTACCACCAgagGTGATGCAAGCACAGGCGACCAGCAGCTCGTGGTGTCCATCGAGTTGAACGGAGTCACGTATGAAGGCGTGTTGTTCCCTTCACAAAACGGGAACGGACAGAACGGCCACCGGCAAATGGTTTCTTAA
- Protein Sequence
- MPSKETLLLEGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVGVPRLPPLPPHAPHVTHDIEYRVREYMKMIQQQRELMRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSASGGKREACRSPPPPAKRRTPRPPSPPRSPPRAAPPPPPHVANANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00723754;
- 80% Identity
- -