Ttri008024.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- retn
- Assembly
- GCA_905220615.1
- Location
- HG992322.1:4280070-4289876[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-19 4.7e-16 59.2 0.0 17 89 33 103 27 103 0.93
Sequence Information
- Coding Sequence
- ATGATTGCTTCCATAAACAATGGCTATTGTGAGGGGCACAACGGACTCAATGGCTGCCATTTGACAGATAACGGACCTTTCAGCATTTCTAGTCCAAGAACACCAATAAACCGGCTTCCGATAATGGCGAAGTCAGTGTTAGATCTTTACGAGCTGTACAACTTGGTCATAGCTCGCGGTGGGCTGGTCGAAGTCATCAATAAGAAGTTGTGGCAAGAAATCATCAAGGGACTGCGGCTACCATCTTCAATCACGTCGGCCGCGTTTACTTTACGTACACAATATATGAAGTACCTATATGACTATGAATGTGATAAGAAGAACCTGTCGACTCGCAATGAACTTGACGCAGCTATTGAGGGAAACAAACGTGAAGGACGCAGAGCTTCTGGACAGTACGATGCACAGGCGGCTCTAGCTATGCCTCCGTTACAGCGTGGAGTGCCAGCATCTCTTGCCCAGCTATCGCAGCATATGCAGCCGTTGTCGCTGTCATTGGGAGGGTCTGTTGGGGGCATGCCGAGGCTACCACCGCTCCCACCACATGCTGGTCACTTAGCACCACACGAATTGGAATATCGCGTGAGGGAATACATGAAACTGATACAGCAACAGCAGAGAGATTTTAGACGGAATGGATCTGAATCACCACCGGGCGGTACCCCTACGCCAGGTGTAATGTCGCCACGTGACGCCGCGCTCAGTGCCCTAGACGTGTCACGCCTCACACTGTGGTCGTTCTACAACAACAACAATAACAATTCACCACAACCTGAGCTAGAGCCACAACGAGAGGCATTAAACCTGAGCGAGAGTCCAAATTCCAGTATTTGTGGCAAACGTGAAGCTTGTCGTTCCCCACCACCGCCGGCGAAACGTCGCACTCCTGCGCCACGGTCACCACCAGCTCCCCCACCTTCGAACACAAATGCACACAACAATAATAATCAGCCACATGTAAATGGCACAAATGGTGCTGCATTTAAAATTACTACTCGAGGTGATGCGACAACAGGTGACCAGCAATTAGTGGTATCAATAGAACTGAATGGTGTCACATATGAGGGTGTATTATTCCCATCACAGAACGGTAACCCCACGAACACACAACATAGACCCATGGTCTCTTAG
- Protein Sequence
- MIASINNGYCEGHNGLNGCHLTDNGPFSISSPRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECDKKNLSTRNELDAAIEGNKREGRRASGQYDAQAALAMPPLQRGVPASLAQLSQHMQPLSLSLGGSVGGMPRLPPLPPHAGHLAPHELEYRVREYMKLIQQQQRDFRRNGSESPPGGTPTPGVMSPRDAALSALDVSRLTLWSFYNNNNNNSPQPELEPQREALNLSESPNSSICGKREACRSPPPPAKRRTPAPRSPPAPPPSNTNAHNNNNQPHVNGTNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNPTNTQHRPMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_01451254;
- 80% Identity
- -