Astr002241.1
Basic Information
- Insect
- Agriphila straminella
- Gene Symbol
- retn
- Assembly
- GCA_950108535.1
- Location
- OX467303.1:29544119-29552184[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-20 3.3e-16 60.4 0.0 15 89 7 79 2 79 0.94 2 2 6.5 2.2e+04 -3.1 0.0 25 38 208 221 170 222 0.66
Sequence Information
- Coding Sequence
- ATGAATAATAAAGTAGGAAGAAGATGCACTCCGATCAACAGACTGCCGATCATGGCCAAGTCTGTGCTGGACTTGTATGAGCTGTACAACTTGGTGATCGCACGTGGGGGCCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAGGGACTTAGGCTGCCATCGTCCATCACGTCCGCTGCCTTCACACTCCGCACACAGTACATGAAATACCTGTATGACTACGAATGCGAGAAGAAGAACCTGTCAACGAGGAGTGAGCTGGATGCAGCCATAGAAGGCAACAAGAGGGAAGGCAGGCGAGCCTCAGGCCAGTACGACGCGCAAGCGGCTCTAGCTATGCCCCCCCTGAACCGCGTGCCAGCGTCGCTCGCGCAGCTGTCCCAGCACATGCAGCCGCTGTCTGCCCTCTCGCTGGGGGGCGTCCCCCGTCTCCCCCCCCTACCGCCGCACGCGCCGCACATCTCGCAGCACGATATTGAGTACCGCGTGCGGGAGTACATGAAGATGATACAGCAGCAACGGGAGCTGATGAGGAATGGTTCCGAATCGCCCCCAGGGTCTAACGGCCCCGCCCCTATAATGTCGCCCCGCGACGCGGCCGCACTCAGCGCCATCGACGTCTCCCGCCTCACTCTCTGGTCCctctacaacaacaacaacaacagcccCCAGCCCGAGCTGGAGCCACAACGTGAGGCTCTAAATCTTAGCGAGAGCCCCAACTCCAGCACGAGTGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCCCGCCGCCTGCCAAGCGGCGCACCCCGCGCCCGCCCTCGCCGCGCGTGCCCTCCCCGCCGCGCTGCCCGCCGCCCGCTCAACTCAACGGCAACGGACCTTCCAATAGTGTCAATGGAGCCGCTTTCAAGATCACAACTAGAGGTGATGCAACCACAGGCGACCAGCAACTAGTCGTCTCAATAGAACTGAACGGTGTCACATACGAGGGTGTTTTATTCCCATCACAGAGTGGGAACGGGCAGAACGGCCACAATAGGCAAATGGTGTCTTAA
- Protein Sequence
- MNNKVGRRCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSALSLGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPELEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRVPSPPRCPPPAQLNGNGPSNSVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQSGNGQNGHNRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -