Hcom028385.1
Basic Information
- Insect
- Hesperia comma
- Gene Symbol
- retn
- Assembly
- GCA_905404135.1
- Location
- FR990031.1:3990428-3998570[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-17 1.6e-13 51.6 0.1 29 89 4 62 1 62 0.93 2 2 1.3 5.2e+03 -1.3 0.0 10 38 159 197 148 200 0.52
Sequence Information
- Coding Sequence
- ATGGCCAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGGCTCGTCGAGGTGATAAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTCCGGCTGCCCTCCTCCATCACTTCGGCTGCCTTCACTCTGCGCACTCAATACATGAAGTACCTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCCACGCGCAGCGAGCTGGACGCGGCCATCGAGGGCAACAAGCGCGAGGGCCGCCGCGCGTCCGGCCAGTACGACGCGCAAGCCGCGCTGGCTATGCCACCTCTAAACCGCGTGCCGGCGTCCCTCGCGCAGTTGTCCCAACACATGCAGCCGCTGTCCCTGTCGCTGGGCGGCGTCCCGCGACTGCCCCCGCTGCCGCCGCACGCGCCGCACGTCACGCACGACATAGAGTACCGCGTCCGGGAGTACATGAAGATGATACAGCAGCAACGCGAGCTGATGAGGAATGGATCCGAATCCCCTCCCAGCGCGCCGATGGTATCCCCCCGCGACGCGGCACTCTCCGCCATCGACGTGTCGCGCCTGACTCTCTGGTCGCTCTACAACAACAACAACAACAGCCCGCAACCGGACCTCGAGCCGCAACGGGAAGCGTTAAACCTAAGCGAGAGCCCGAACTCGAGCACGAGCGGCAAGCGCGAGGCGTGCCGGTCGCCGCCGCCGCCGGCCAAGCGCCGCACGCCGCGCCCGCCGTCGCCCCGCGCGCCGTCCCCGCCGCGCGCGCCGCCCGCGCCGCGCGATGCGCCCGCGCATGTCAACGGCAATACGAATGGTGTTAATGGGGCTGCGTTTAAGATTACTACCAGAGGAGACGCGAGCACCGGCGACCAACAACTGGTGGTGTCTATTGAACTCAACGGCGTCACGTACGAGGGCGTGCTGTTCCCGGCCCAGAGCGGGAACGGACAGAACGGGCACAGGCAAATGGTTTCCTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHVTHDIEYRVREYMKMIQQQRELMRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSTSGKREACRSPPPPAKRRTPRPPSPRAPSPPRAPPAPRDAPAHVNGNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPAQSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_01082220;
- 80% Identity
- -