Tocu015612.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- retn
- Assembly
- GCA_963555595.1
- Location
- OY741974.1:6781382-6787085[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-19 4.5e-16 59.5 0.0 17 89 34 104 13 104 0.93 2 2 5.1 1.3e+04 -2.9 0.0 25 38 237 250 198 251 0.58
Sequence Information
- Coding Sequence
- ATGGCCACAAACAATCCGCTTGGAACAAGCAGTTTGGATGACTTCCGCAAGGGCCACACGGGCTGTGCTAAATCTGGTCCAGTAAACTTGCGCGCGTGTCGAACCCCAATAAACCGGCTGCCAATAATGGCAAAGTCAGTGTTGGACTTATACGAGCTGTACAACCTGGTGATCGCGCGGGGTGGTCTGGTGGAGGTGATCAACAAGAAGTTGTGGCAGGAGATCATTAAAGGATTGCGGCTGCCGTCCTCCATCACGTCTGCCGCCTTCACACTACGCACACAATACATGAAGTACCTATACGACTACGAGTGTGAAAAGAAGAACTTGTCAACTCGGAGCGAGTTGGACGCCGCCATCGAAGGCAACAAGCGGGAAGGAAGACGAGCATCCGGACAGTATGATGCGCAAGCGGCGCTCGCTATGCCGCCGCTAAACCGAGGAGTTCCTGCATCCTTGGCGCAGTTATCACAGCACATGCAGCCACTGTCGCTATCCCTTGGAGGAGGAGTGGGTGGTGTACCCCGTCTTCCTCCGTTACCTCCTCATGCACCTCATATCTCGCCTCATGATCTGGAGTACCGCGTCCGGGAGTACATGAAGATGATCCAGCAGCAGCGAGAGTTGATGAGGAATGGATCAGAATCCCCTCCGAACTCAAATGGTCCAGCTCCGATGATGTCACCCCGCGACGCCGCTGCTCTCAGTGCCATCGACGTGTCACGCCTCACGCTGTGGTCGCTctacaacaacaacaacaacagcCCGCAGCCAGACCTTGAGCCGCAACGTGAGGCGCTGAACCTAAGCGAGAGCCCTAACTCAATAACGAGCGGTGGTAAGCGTGAGGCTTGCCGCTCCCCCCCTCCTCCCGCCAAGCGGCGCACCCCGCGCCCTCCCTCCCCACGCTCCCCGCGCTCTCCACCGCGCCTTCGCCTGCCCACACCGCAGCCGCAatcgcagccgcagccgcaacTCAATGGTACCAATGGCGTCAATGGAGCAGCTTTTAAGATAACCACAAGAGgtgATGCAACTACAGGCGATCAACAGTTAGTCGTCTCCATAGAATTAAACGGTGTGACGTACGAAGGCGTACTCTTCCCCTCACAAAACGGTAACGGTCAAAATGGTCACAGACAAATGGTATCTTAA
- Protein Sequence
- MATNNPLGTSSLDDFRKGHTGCAKSGPVNLRACRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISPHDLEYRVREYMKMIQQQRELMRNGSESPPNSNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSITSGGKREACRSPPPPAKRRTPRPPSPRSPRSPPRLRLPTPQPQSQPQPQLNGTNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_01436800;
- 80% Identity
- -