Ofur009167.1
Basic Information
- Insect
- Ostrinia furnacalis
- Gene Symbol
- retn
- Assembly
- GCA_004193835.1
- Location
- NW:579589-645136[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-26 2.2e-23 82.2 0.0 1 89 45 131 45 131 0.96
Sequence Information
- Coding Sequence
- ATGgagtttttggattttttcaacATGATCAAGGAGGAGCCTCACCGCAGTCCGCCTCACAGTGAGCCTCCGAAGATGCCTAACTTTTTTGAGGTTGATAAGAAGAAGTTATACGAGATCAGCGACGACCCACAAAGGAAGGAATTCCTCGACGATCTGTTCTCGTTCATGCAAAAGCGAGGAACCCCCATAAACCGGCTTCCCATCATGGCCAAGTCAGTTCTGGACCTGTATGAGCTGTACAACCTGGTCATCGCCCGCGGGGGGCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGTCTGCGACTGCCGAGCTCCATCACGTCTGCTGCTTTCACATTGCGAACACAatacatGAAGTACTTATACGACTACGAGTGCGAGAAGAAGAATCTGTCTACCAGGAGCGAGCTGGACGCAGCCATAGAGGGCAACAAGAGGGAGGGCAGGCGCGCCTCCGGCCAGTACGACGCGCAGGCCGCATTAGCCATGGTCAGCATACCCCCGCTCAGCCGAGGTGTCCCAGCGTCTCTCGCGCAGCTGTCCCAGCACATGCAGCCTCTGTCCCTTTCTCTCGgaggcggcgtgggcggcgtcCCGCGCTTGCCCCCCCTCCCGCCGCATGCGCCTCACATCTCACAGCACGATATCGAGTACCGCGTGAGGGAATATATGAAGATGATCCAGCAGCAGAGGGAGCTGATGAGGAATGGTTCAGAATCTCCGCCCGGTTCGAACGGGCCGGCACCTATAATGTCGCCCCGCGACGCCGCCGCCCTCAGTGCCATAGACGTCTCCCGCTTGACTCTCTGGTCTCTCTACAACAATAACAACAACAGTCCACAGCCTGAGCTGGAGCCTCAACGCGAGGCCCTAAACCTCAGCGAGAGTCCCAACTCCAACATGAGCGGAGGCAAGCGCGAGGCGTGCCGCtccccgccgccgcccgccaagCGCCGCACCCCGCGCCCGCCCTCCCCCCGCCCGCcgtcgccgcgcgcgccgccgccggtcAACGGCAGCCCGCCGAACGGCGTCAATGGCGCCGCTTTCAAGATCACCACTCGAGGTGACGCAAGCACAGGCGACCAGCAGCTCGTGGTGTCCATAGAACTCAACGGAGTAACATACGAAGGCGTGCTCTTCCCATCGCAGAACGGCAATGGGCAGAACGGACACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MEFLDFFNMIKEEPHRSPPHSEPPKMPNFFEVDKKKLYEISDDPQRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMVSIPPLSRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPELEPQREALNLSESPNSNMSGGKREACRSPPPPAKRRTPRPPSPRPPSPRAPPPVNGSPPNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00364697;
- 80% Identity
- -