Tlin024180.1
Basic Information
- Insect
- Thymelicus lineola
- Gene Symbol
- retn
- Assembly
- GCA_963932265.1
- Location
- OZ010700.1:4062841-4070365[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-20 1.8e-16 61.2 0.0 16 89 73 144 65 144 0.93 2 2 3.2 9.4e+03 -2.0 0.0 10 38 242 280 232 282 0.51
Sequence Information
- Coding Sequence
- ATGATGATTGGTATAGACCCCAACCGCTGGATCCAAAGGACCCAAGCAAGATCAGTCAGATTTTCACCAATTAGGACAGACCTAGCAGTGGCCCTGATAGATAACAACTTCCACAGAAAGACAAAAGCTTTCGTCTTTGGGCTGATAGATACAAAAACAGAAGGACCACAATGTCTTCATCTTGGAAATGAATTGAAACCTCAACATTTCCTTGTTTCAGGCACACCAATAAATAGGCTGCCGATCATGGCCAAGTCAGTGCTGGACCTGTACGAGCTATACAACCTGGTGATCGCCCGTGGCGGCCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGTCTCCGTCTGCCGTCTTCCATCACTTCTGCGGCGTTCACTCTTCGTACTCAATACATGAAGTACCTATATGACTACGAGTGTGAGAAGAAGAACCTGTCGACCCGCAGCGAGCTGGACGCCGCCATCGAGGGCAATAAGCGGGAGGGCCGCCGCGCCTCCGGACAGTATGACGCTCAAGCCGCTCTGGCTATGCCACCTCTAAACCGTGGCGTGCCAGCGTCCCTCGCGCAGTTAACCCAACACATGCAGCCGCTGTCCCTGTCCCTCGGCGGCGTCCCGCGACTCCCACCGCTGCCACCGCACGCGCCACACGTCACGCATGATATAGAGTACCGCGTCCGGGAGTACATGAAGATGATACAACAGCAACGCGAGCTGATGAGGAATGGATCAGAATCCCCTCCCAGCGCTCCGATGGTGTCGCCCCGTGACGCGGCACTCTCCGCCATCGACGTGTCGCGCCTGACGCTCTGGTCGCTatacaataacaacaacaacagccCGCAACCGGACCTCGAGCCGCAACGGGAAGCACTAAATCTAAGCGAGAGCCCGAACTCCAGCACTAGTGGCAAGCGTGAGGCGTGCCGCTCCCCCCCGCCCCCCGCCAAGCGCCGCACCCCTCGCCCGCCCTCCCCCCGCGCGCCCTCCCCGCGGTCGCCACGAGCGCCGCACGCGTCGCACGGCCCGCATGTGCCGCAGCCGCATGCGACGCGCGACGCTCATGGGCATGTTAATGGGAATGCCAATGGCGTTAATGGCGCGGCGTTCAAGATCACTACTAGagGTGATGCAAGCACAGGCGACCAGCAGCTGGTGGTGTCCATAGAGCTCAACGGCGTCACGTACGAGGGCGTGCTGTTCCCGTCCCAGAGCGGGAACGGACAGAACGGGCACAGGCAAATGGTTTCTTAA
- Protein Sequence
- MMIGIDPNRWIQRTQARSVRFSPIRTDLAVALIDNNFHRKTKAFVFGLIDTKTEGPQCLHLGNELKPQHFLVSGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLTQHMQPLSLSLGGVPRLPPLPPHAPHVTHDIEYRVREYMKMIQQQRELMRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSTSGKREACRSPPPPAKRRTPRPPSPRAPSPRSPRAPHASHGPHVPQPHATRDAHGHVNGNANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00970191; iTF_00971016; iTF_01437751; iTF_00277162; iTF_00673277;
- 80% Identity
- -