Lcam017381.1
Basic Information
- Insect
- Limenitis camilla
- Gene Symbol
- retn
- Assembly
- GCA_905147385.1
- Location
- LR990242.1:4856779-4867863[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-20 5e-17 62.8 0.0 13 89 1 75 1 75 0.95 2 2 3.3 1.2e+04 -2.6 0.0 25 38 199 212 163 213 0.55
Sequence Information
- Coding Sequence
- ATGAGAAGCCGTCGTACTCCAATCAATAGACTGCCGATAATGGCGAAGTCAGTACTAGATCTGTACGAGTTGTACAACCTGGTGATAGCTCGTGGTGGACTGGTGGAAGTGATTAACAAGAAGCTCTGGCAAGAAATCATCAAGGGACTGCGGCTGCCTTCCTCCATCACCTCAGCCGCGTTCACTTTGCGTACACAATATATGAAGTATCTGTATGACTACGAATGTGAGAAGAAGAACCTGTCCACCAGGAGCGAGTTGGACGCCGCCATCGAGGGCAACAAGCGTGAGGGGCGCCGCGCCTCTGGACAGTACGATGCGCAGGCCGCGTTGGGCATGCCACCTCTTAGCAGAGTGCCAGCGTCTCTCGCGCAGTTATCCCAGCACATGCAGCCCCTGTCTCTCTCACTGGGGGGCGGAGTGCCACGTCTACCTCCCTTGCCTCCTCACGCGCCGCATATATCACAACATGACATCGAGTACCGAGTTAGAGAGTATATGAAGATGATACAGCAGCAACGCGAGATGATTAGAAATGGTTCCGAGTCTCCCCCTGGTGCACCTATGGTATCCCCCCGAGACGCAGCATTATCTGCCATCGATGTATCAAGACTTACGCTTTGGTCATTATACAACAACAACAACAACAGCCCGCAGCCTGAACTCGAACCTCAACGCGAGGCTTTGAACCTGAGCGAAAGTCCTAACTCAAGTCTTGGTGGGATTAAGCGGGAGGCCTGCAGGTCTCCTCCTCCCCCGGCCAAGCGTCGCACCCCCCGGCCACCCTCACCCTCCCCTGCGCCCACCTCTCCACAAACACCACCGAGGAATCACCACGTGAATGGGAATGCTAATACAAATGGAGTGCACGGTGCCGCCTTCAAAATTACTACAAGAGGTGACGCAACAACAGGCGACCAACAACTCGTAGTGTCAATCGAACTCAACGGGGTAACGTACGAAGGTGTTCTGTTCCCCTCACAGAACGGCAACGGACAAAATGGCCACCGGCAAATGGTCTCTTAA
- Protein Sequence
- MRSRRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLSRVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQREMIRNGSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPELEPQREALNLSESPNSSLGGIKREACRSPPPPAKRRTPRPPSPSPAPTSPQTPPRNHHVNGNANTNGVHGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00642129;
- 80% Identity
- -