Oqua027525.2
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- retn
- Assembly
- GCA_949316235.1
- Location
- OX438757.1:12600886-12612400[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 3.5e-16 60.3 0.0 17 89 16 86 11 86 0.95 2 2 6.2 1.9e+04 -3.0 0.0 25 38 218 231 181 232 0.65
Sequence Information
- Coding Sequence
- ATGATTAACTGCAGACAGGAAGACGGATTGACAAATAGTCCTTTAGGCACACCAATTAATCGGCTGCCGATAATGGCCAAGTCCGTGCTCGATTTATACGAGCTGTACAACCTGGTGATTGCCCGAGGTGGTCTGGTAGAGGTGATCAACAAGAAGCTTTGGCAGGAGATCATCAAGGGGCTACGGTTGCCGTCGTCCATTACGTCTGCTGCCTTCACTTTACGCACACAGTATATGAAGTACCTATACGACTACGAATGCGAAAAGAAGAACTTGTCCACCCGGAGTGAGCTGGATGCGGCTATTGAAGGGAACAAGCGCGAGGGACGACGTGCTTCTGGCCAGTATGACGCCCAGGCGGCTCTCGCTATGCCGCAACTAAACCGTGGAGTGCCAGCTTCCTTAGCCCAGTTAACCCAGCACATGCAGCCCCTGTCGCTCTCCCTTGGCGGAGGAGTCGCTGGGGTGCCGCGCCTACCCCCTCTACCGCCGCACGCGCCGCACATATCCCAGCACGATATAGAGTACCGAGTCAGAGAGTACATGAAGATGATACAGCAGCAGCGAGAACTGATGAGGAATGGCTCTGAATCTCCGCCAGGCAACGGCCCAACGACGATGATGTCTCCTCGAGATGCGGCCGCTCTGAGCGCGATCGACGTCTCTCGGCTGACGCTGTGGTCCCtgtacaacaacaacaacaacagccCTCAGCCCGACCTCGAGCCGCAACGAGAGGCCCTGAACCTCAGTGAGAGCCCCAACTCGTCGATAAGCGGCGGCAAGCGCGAGGCATGCCGATCGCCCCCTCCCCCGGCCAAGCGACGAACCCCTCGCCCGCCGTCGCCCCGCGCGCCCTCCCCGCCGCGACCCGCCAGTCAGCCGTCGCACGCGCAGGTCAACGGGGCCAACACGAATGGTGTGAATGGGGCAGCTTTTAAAATTACCACCAGAGGAGATGCAAGCACTGGCGATCAGCAGCTCGTCGTCTCCATAGAGCTGAACGGCGTCACATACGAAGGAGTCCTCTTCCCCTCGCAGAGCGGCAGTGGTCAGAACGGGCACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MINCRQEDGLTNSPLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPQLNRGVPASLAQLTQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGNGPTTMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSISGGKREACRSPPPPAKRRTPRPPSPRAPSPPRPASQPSHAQVNGANTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQSGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00723754;
- 80% Identity
- -