Aals015715.1
Basic Information
- Insect
- Agonopterix alstromeriana
- Gene Symbol
- retn
- Assembly
- GCA_963924505.1
- Location
- OZ004678.1:10262412-10270513[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-20 6.2e-17 62.2 0.0 14 89 47 120 24 120 0.92 2 2 7.6 1.7e+04 -3.3 0.0 25 38 252 265 215 266 0.67
Sequence Information
- Coding Sequence
- ATGGGGGAAGGAGCCTTGGTCGTCCCTTTGTCTTTTGGCTCGCTTTATGGCCAGATATTCGAACTAGACTACATGTCGTTGTATGACAGTCTGCTAAAACCTTCCTCCACCCTTCCCTACCATTTGCAAGGCATTCCCACTTCGAGTGGCACTCCTATAAACCGGCTGCCCATAATGGCGAAGTCAGTGCTCGATCTATACGAACTCTACAACTTGGTGATCGCCCGAGGCGGTCTGGTGGAGGTCATCAACAAGAAACTGTGGCAGGAGATCATCAAGGGATTGCGGCTACCGTCGTCCATCACGTCAGCTGCCTTCACTTTGCGGACGCAATACATGAAGTACCTTTACGACTATGAGTGTGAGAAGAAGAACTTGTCAACTCGAAGTGAGCTGGACGCTGCTATAGAGGGAAACAAGCGCGAAGGTCGTCGAGCTTCTGGCCAGTACGACGCTCAGGCTGCACTTGCAATGCCGCCTCTCAACCGCGTGCCGGCTTCCCTCGCACAGCTTACCCAGCACATGCAGCCACTCTCTCTATCCCTCGGGGGAGGCGTGGCAGGAATACCACGCCTGCCGCCGTTACCACCGCACGCGCCGCACCTGTCGCAGCATGACATTGAGTACCGCGTCCGGGAGTATATGAAGATGATACAGCAGCAACGTGAGCTTATGAGGAATGGTTCTGAATCTCCGCCTGGCCTAAACGGTCCAACACCGATGATGTCGCCCCGTGACGCTGCGGCTCTCAGCGCTATCGACGTTTCAAGACTGACTCTGTGGTCGCTgtataacaacaacaacaacaacagccCACAGCCAGACCTCGAGCCGCAACGTGAGGCCCTGAACTTAAGTGAGAGCCCAAACTCAAGCATAAGTGGAGGCAAGCGTGAAGCTTGCCGCTCACCCCCGCCCCCCGCTAAGCGACGTACCCCTCGGCCGCCATCCCCCCGTGCTCCGTCGCCTCCACGCCCCACGAGTCTGCCACAGTCCCACACGCAGATCAATGGTGGAAATTCTAACGGTGTTAATGGAGCAGCGTTCAAGATTACTACCAGAGGTGACGCAACGACAGGTGACCAGCAGCTCGTAGTCTCAATAGAACTAAACGGAGTGACGTACGAAGGTGTTCTATTTCCCTCACAAAATGCAGCCGGCATCAACGGTCATAGGCAAATGGTCTCTTAA
- Protein Sequence
- MGEGALVVPLSFGSLYGQIFELDYMSLYDSLLKPSSTLPYHLQGIPTSSGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLTQHMQPLSLSLGGGVAGIPRLPPLPPHAPHLSQHDIEYRVREYMKMIQQQRELMRNGSESPPGLNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSISGGKREACRSPPPPAKRRTPRPPSPRAPSPPRPTSLPQSHTQINGGNSNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNAAGINGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -