Ljuv011311.1
Basic Information
- Insect
- Leptidea juvernica
- Gene Symbol
- retn
- Assembly
- GCA_949711685.1
- Location
- CATIXL010000011.1:6671881-6682576[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-20 2.7e-16 61.0 0.0 16 89 30 101 21 101 0.94 2 2 6.3 2.5e+04 -3.0 0.0 25 38 229 242 194 243 0.61
Sequence Information
- Coding Sequence
- ATGAAATGTCAGATTGACAATTTGTTGGAGGGAAAAAACACACACATAGGCACTCTAATGCTTCCAGAAATGCTGGCAGCCCTAGGTGAAGGCACACCAATAAACCGACTGCCTATAATGGCGAAGTCAGTACTGGATCTCTACGAGTTGTACAACTTGGTGATTGCCCGAGGGGGTCTGGTGGAGGTCATCAACAAGAAGCTCTGGCAGGAAATTATAAAGGGTCTCCGGCTGCCATCCTCCATCACTTCGGCTGCATTCACACTCAGAACACAgTATATGAAATACTTATACGACTACGAGTGCGAGAAGAAGAACTTGTCGACGCGGAGTGAGCTAGACGCTGCCATAGAGGGCAATAAGCGAGAGGGCCGGCGTGCTTCCGGGCAGTACGATGCACAGGCGGCTCTCTCTATGCCCCCCTTGAACCGTGGAGTGCCCGCGTCTCTGGCGCAGTTGTCCCAGCACATGCAGCCGCTCTCCCTCTCGCTGGGGGGCGCGGTAGGGGGCGTCCCCCGCCTGCCCCCACTGCCGCCGCACGCGCCTCACATCACGCAGCATGACATAGAGTACCGCGTGCGGGAGTACATGAAGATGATCCAGCAGCAACGGGAACTAATCAGAAATGGTTCGGAGTCACCGCCTGGCGCTCCCATGGTGTCCCCGCGGGACGCCGCCCTGTCTGCTATCGACGTGTCCCGTCTGACTCTGTGGTCTCTCTACAACAATAACAACAATACCTGCCCACAGCCAGACCTCGAGCCACAACGAGAGGCGCTAAATTTAAGTGAGAGCCCCAACTCAAGTAACGGTATCAAGCGCGAGGCGTGTCGCTCCCCCCCTCCGCCCGCTAAACGCCGCACCCCCCGCCCGCCCTCGCCCCCTCGCTCGCCCCCCGACACTAAGCCCGCCGTACACGCAGCGCATCTGAACGGCAACGCGAACGGAATCAGTGGAGCCGCCTTCAAAATATCCACGAgagGTGATGCGAGCACGGGTGATCAGAAATTAGTTGTATCAATAGAACTGAATGGAGTTACCTACGAAGGCGTCCTGTTCCCCTCACAAACCGGAAATGGACAGAATAACCATCGGCAAATGGTCTCTTAA
- Protein Sequence
- MKCQIDNLLEGKNTHIGTLMLPEMLAALGEGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPPLNRGVPASLAQLSQHMQPLSLSLGGAVGGVPRLPPLPPHAPHITQHDIEYRVREYMKMIQQQRELIRNGSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNTCPQPDLEPQREALNLSESPNSSNGIKREACRSPPPPAKRRTPRPPSPPRSPPDTKPAVHAAHLNGNANGISGAAFKISTRGDASTGDQKLVVSIELNGVTYEGVLFPSQTGNGQNNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00875087; iTF_00875936; iTF_00114715; iTF_00770886;
- 80% Identity
- iTF_00875087;