Calb012800.1
Basic Information
- Insect
- Cyclophora albipunctata
- Gene Symbol
- retn
- Assembly
- GCA_963082685.1
- Location
- OY720127.1:3601861-3606901[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-21 5.5e-18 65.6 0.0 10 89 16 93 8 93 0.91 2 2 4.5 1e+04 -2.6 0.0 25 38 224 237 186 238 0.57
Sequence Information
- Coding Sequence
- ATGTTTTACAGTGCGATACGATTCGCGTCGTTTCTTCTAAATGGCTTCCGATGCTTCAATAACAGAGGTACTCCTATAAACCGACTGCCGATCATGGCCAAGTCTGTGCTTGACCTGTATGAGCTGTACAACTTGGTGATCGCCCGCGGCGGCCTCGTCGAGGTCATCAACAAGAAACTCTGGCAAGAAATCATTAAAGGACTCCGATTACCTTCCTCTATCACATCGGCAGCTTTCACTTTACGTACACAGTATATGAAATATCTGTATGACTATGAGTGCGAGAAGAAGAACCTTTCGACCCGTAGCGAGTTGGACGCGGCTATTGAAGGGAACAAACGGGAAGGGCGAAGGGCGTCGGGACAATATGACGCTCAGGCGGCGCTCGCTATGCCCCCTCTGAACCGAGTGCCCGCGTCGCTCGCGCAGCTGTCCCAGCACATGCAGCCCCTGTCGCTCTCGCTGGCCGGCGGGGTGGGCGGCGTGCCCCGCCTGCCCCCCCTGCCCCCGCACGCGCCGCACATCTCACAACACGACATAGAGTACAGAGTCAGGGAATACATGAAGATGATACAGCAGCAACGAGAGCTGATGAGGAACGGCTCGGAGTCGCCCCCCAGCGCCAACGGGCCGACCCCCATGATGTCCCCCCGCGACGCGGCGCTCAGCGCCATCGACGTGTCCCGCCTCACGCTCTGGTCTCTctacaacaacaacaacaacagtCCGCAGCCCGACTTGGAGCCTCAACGCGAGGCCTTGAACCTGAGCGAGAGCCCTAACTCGAGCGGCAGCGGCGGCAAGCGCGAGGCGTGCCGCGACTCGTGccgctcgccgccgccgcccgccaaGCGCCGCACGCCGCGCCCGCCCTCGCCGCGCGCcgagccgccgccgcgcgcgccgcgccccaACGGAGACGCGCCCCAAGCCGCGCACGGCGCCGCCTTCAAGATCACCACTAGAGgtGACGCGACAACAGGCGACCAGCAACTGGTAGTCTCAATAGAACTGAACGGAGTCACATACGAAGGAGTCCTCTTTCCTTCACAAAGCGGCAACGGACAAAACGGGCACAGGCAAATGGTCTCCTAA
- Protein Sequence
- MFYSAIRFASFLLNGFRCFNNRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLAGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPSANGPTPMMSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSGSGGKREACRDSCRSPPPPAKRRTPRPPSPRAEPPPRAPRPNGDAPQAAHGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00723754;
- 80% Identity
- -