Ufer017533.2
Basic Information
- Insect
- Udea ferrugalis
- Gene Symbol
- retn
- Assembly
- GCA_950022985.1
- Location
- OX465530.1:11133858-11144164[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-20 1.9e-16 61.1 0.0 16 89 30 101 22 101 0.93 2 2 8.2 2.3e+04 -3.3 0.0 25 38 233 246 196 247 0.68
Sequence Information
- Coding Sequence
- ATGGGAGGCCGCCGTTACTCCGCGCTGGCTTCTCATTGGCCCGCGGCGGGGTTGCGGCCGCGAAGGGCCTTGATACAACTCTCGATAAGCGGTACTCCAATCAACCGGCTGCCGATCATGGCTAAGTCTGTCCTGGACCTATACGAGCTGTACAACCTGGTGATCGCGCGAGGAGGCCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAAATCATCAAGGGTCTACGGCTGCCGTCTTCTATCACCTCTGCTGCGTTCACCCTGCGTACACAATACATGAAATACCTGTACGATTACGAGTGCGAGAAGAAGAACCTGTCCACACGGAGCGAGCTGGATGCTGCCATTGAGGGCAACAAGCGTGAGGGCAGACGTGCATCAGGCCAGTACGACGCGCAGGCGGCACTTGCTATGCCGCCACTGAGCCGCGGGGTGCCTGCGTCTCTTGCGCAGCTCTCACAACACATGCAGCCCCTTTCCCTCTCTCTGGGAGGAGTTGGAGGAGTTCCCCGTCTACCACCCCTGCCGCCGCATGCGCCGCACATCTCACAGCATGACATCGAGTACCGCGTGCGGGAGTACATGAAGATGATCCAGCAGCAACGGGAGCTGATGAGAAATGGTTCAGAATCTCCTCCAGGGTCGAATGGGCCTGCTCCCATAATGTCACCGCGCGATGCAGCAGCCCTCAGCGCCATCGACGTGTCCCGCCTCACACTCTGGTCActctacaacaacaacaacaacagtccGCAGCCAGACCTGGAGCCACAACGGGAGGCTTTAAACCTGAGTGAGAGTCCAAACTCGAGCACAAGTGGGGGCAAGCGCGAAGCGTGTCGCTCCCCTTTGCCGCCGGCCAAGCGCCGCACGCCGCGTCCGCCCTCGCCCCGCGCGCCTTCGCCCCCACGCTGCCCGCCGCCGCAGCAGCTCAACGGCAGTCCGCCTTCTAACGGAGTCAATGGGGCTGCCTTCAAAATCACAACAAGAGGTGACGCAAACACAGGAGACCAGCAACTGGTcgtgtcaatagaactaaacgGAGTCACATACGAAGGCGTGTTATTCCCTTCACAAAATGGAAGCGGACAAAACGGCCACAGGCAAATGGTATCCTAA
- Protein Sequence
- MGGRRYSALASHWPAAGLRPRRALIQLSISGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPLPPAKRRTPRPPSPRAPSPPRCPPPQQLNGSPPSNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00858329;
- 80% Identity
- -