Etri016077.1
Basic Information
- Insect
- Epirrhoe tristata
- Gene Symbol
- retn
- Assembly
- GCA_951394285.1
- Location
- OX596154.1:6548418-6559033[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-20 9.9e-17 61.6 0.0 16 89 43 114 39 114 0.95 2 2 7.5 1.7e+04 -3.3 0.0 25 38 244 257 208 258 0.69
Sequence Information
- Coding Sequence
- ATGGGATCCGCGACCGCAGCGCGCGCGTTATCGCGCCACCGCAGCCGATTGTCATTCGTTTCTAATAAATTGATACGAGGCGCGGTGCCGCGGGAACACGGCCGGCCGATTGGTCGAGGCGTTCCCCAAGGAACCCCTATAAACCGGCTGCCAATTATGGCCAAGTCCGTGTTGGACCTCTACGAGCTGTACAACCTGGTGATCGCGCGAGGCGGCCTGGTGGAGGTGATCAATAAGAAGCTGTGGCAGGAGATCATCAAGGGACTCCGGCTGCCTTCTTCCATCACGTCTGCGGCCTTCACGCTGCGTACACAATACATGAAATACCTGTACGACTACGAGTGTGAGAAGAAGAATCTGTCGACTCGCAGCGAGCTGGACGCAGCCATCGAAGGCAATAAGCGGGAGGGGAGACGCGCCTCGGGACAGTACGATGCTCAGGCTGCACTCGGCATGCCTCCTCTGAACCGCGGGGTGCCCGCCTCGCTCGCACAGCTGTCTCAGCATATGCAGCCTCTCTCTCTCTCACTGGGAGGGGGGGTACCTCGCCTGCCCCCGCTTCCCCCGCACGCCCCGCATATCTCACAACATGACATCGAGTATAGAGTTAGGGAGTACATGAAGATGATACAGACACAACGGGAGCTGATGAGAAATGGTTCAGAATCCCCGCCAAGTGCGAACGGTCCCGCGTCCATGATGTCCCCACGTGACGCCGCAGCGCTCAGTGCCATCGATGTCTCCCGCCTCACACTCTGGTCTCTCTACAATAACAACAACAATAACAGCCCCGCGCCCGACCTGGAGCCACAACGTGAGGCACTCAATCTCAGTGAGAGTCCAAACTCGAGCACAAGCGGCAAGCGCGAAGCCTGCCGCTCTCCCCCTCCGCCGGCGAAGCGCCGCACCCCCCTGCCTCCCTCCCCACGGCTGCCTTCCCCCCCGCGACAGGCCTGCGCGCCCGCACCCGCACAGATGAACGGAGGCACTCCTAATGGAACTAATGGAGCCGCTTTCAAGATTACAACTAGAGgTGATGCTAATACAGGAGATCAACAACTCGTTGTATCAATAGAACTGAACGGTGTCACATATGAAGGCGTCCTATTCCCCTCACAAAACGGCAATGGTCCGAACGGTCACAGGCAGATGGTGTCTTAA
- Protein Sequence
- MGSATAARALSRHRSRLSFVSNKLIRGAVPREHGRPIGRGVPQGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSANGPASMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGKREACRSPPPPAKRRTPLPPSPRLPSPPRQACAPAPAQMNGGTPNGTNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGPNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00723754;
- 80% Identity
- -