Yplu007042.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- retn
- Assembly
- GCA_947310845.1
- Location
- OX371210.1:13206480-13218472[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-20 2.4e-16 60.7 0.0 17 89 9 79 4 79 0.95
Sequence Information
- Coding Sequence
- ATGACAGCAAAATTATTGATTACTGGAACACCGATCAACCGGCTTCCGATCATGGCGAAGTCAGTGCTGGACTTGTACGAGCTGTACAACCTGGTGATCGCCCGCGGAGGGTTGGTGGAGGTCATCAACAAAAAGCTGTGGCAAGAGATCATCAAGGGGCTCCGGCTGCCCTCGTCCATCACCTCGGCGGCTTTCACTTTGCGGACACAATATATGAAGTACCTATACGATTATGAGTGCGAGAAGAAAAATCTATCAACCCGGAGCGAGCTGGACGCAGCCATCGAGGGCAACAAGCGTGAGGGACGCCGCGCGAGTGGCCAGTACGATGCGCAGGCGGCGTTAGCAATGCCACCAATGAACCGCGGCGTCCCTGCGTCGCTTGCGCAGCTAACACAACACATGCAGCCCCTGTCGCTGTCCCTCGGCGGGGGGGTCGGGGGGGTGCCCCGCCTGCCCCCGCTGCCCCCCCACGCCCCGCACATGGCCCCCCACGAGCTGGAGTACAGGGTCAGGGAATACATGAAACTCATTCAACAACAGCAGAGGGATTTCAGAAGAAATGGCTCGGAGTCCCCCCCAAACAGCAACGGCCCTTCCGGCGTGATGTCTCCGCGCGACGCCGCGCTCTCCACACTCGACGTGTCGCGCCTGGCGCTCTGGTCGCTCTACAATAATAACAACAACAACAGCCCACAACCAGACCTCGAGCCGCAACGCGAGGCCCTGAACCTCAGTGAGAGTCCGAATTCCAGCACCTGCGTGAAGCGCGAGGCGTGCCGCTCTCCCCCCCCGCCCGCTAAGCGGCGCACCCCGCGGCCGCCCTCCCCCCGCGCGCCCTCCCCGTCCCCGCGCCCGCCCAGCCAGCCCGTCAACGGGGCGCACGGCGCTGCGTTCAAAATCACAACGCGAGGCGACGCCAACACCGGCGACCAACAACTGGTGGTCTCGATCGAGCTCAACGGCGTCACATACGAGGGCGTGCTTTTCCCATCATCACAGAACGAGAGCTCCCCCACCACACACCACAGGCCTATGGTCTCCTAG
- Protein Sequence
- MTAKLLITGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPMNRGVPASLAQLTQHMQPLSLSLGGGVGGVPRLPPLPPHAPHMAPHELEYRVREYMKLIQQQQRDFRRNGSESPPNSNGPSGVMSPRDAALSTLDVSRLALWSLYNNNNNNSPQPDLEPQREALNLSESPNSSTCVKREACRSPPPPAKRRTPRPPSPRAPSPSPRPPSQPVNGAHGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSSQNESSPTTHHRPMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_01547311; iTF_00162291; iTF_01560916;
- 80% Identity
- -