Vcam022645.1
Basic Information
- Insect
- Venusia cambrica
- Gene Symbol
- retn
- Assembly
- GCA_951394065.1
- Location
- OX596065.1:1499138-1508335[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 3.9e-16 59.9 0.0 16 89 21 92 17 92 0.93 2 2 6 1.9e+04 -3.2 0.0 25 38 223 236 186 237 0.70
Sequence Information
- Coding Sequence
- ATGAGAGGGGAAGAGGTAGACCGAtcaagagatggatggattgtagGAGGGATGATAAGGGCAAGAACGCCAATCAACCGACTGCCGATAATGGCCAAGTCAGTGCTAGACCTGTATGAGTTGTACAACCTGGTGATCGCACGCGGAGGACTGGTAGAGGTCATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGGCTGCGACTGCCGTCCTCCATCACATCGGCGGCTTTCACGCTACGCACACAATACATGAAGTACCTGTACGACTACGAGTGTGAAAAGAAGAACCTTTCCACCAGAAGCGAGCTGGACGCAGCCATAGAAGGCAACAAGCGGGAAGGCAGGCGCGCGTCCGGCCAGTACGACGCGCAGGCGGCTCTCGGCATGCCACCAATGAACCGCGGGGTGCCAGCCTCGCTCGCCCAACTCTCTCAGCACATGCAACCCCTCTCGCTCTCTCTCGGAGGGGGGGTGCCTCGTCTCCCTCCACTGCCTCCGCACGCCCCTCACATATCGCAGCACGACATCGAGTACAGAGTCAGAGAGTACATGAAGATGATACAGACGCAGCGGGAGCTCATGAGAAATGGATCGGAGTCCCCGCCCAGCGCAGCCCCCGGCCCGCCATCCATGATGTCTCCGCGCGACGCCGCCGCCCTCAGCGCCATCGACGTCTCCCGCCTGACGCTGTGGTCGCtgtacaacaacaacaacaacaacagtcCAGCGCCCGACTTGGAGCCACAACGTGAGGCCCTCAACCTAAGCGAGAGTCCGAACTCGAGCACAAGCGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCCCACCGCCCGCGAAGCGCCGCACCCCGCGCCCCCCCTCCCCACGGCTGCCCTCCCCCCCACGGCAGTCCTGTCCGCCGCCTGCGCAGCTCAACGGGGGCAGTCCGCCGAGCGGGGCTAATGGGGCCGCCTTCAAAATTACCACCAGAGGTGATGCAAATACCGGTGATCAGCAACTCGTCGTGTCGATAGAACTTAACGGTGTCACGTACGAAGGCGTTCTGTTCCCCTCGCAAAACGGCAACGGACAAAACGGTCATAGGCAAATGGTCTCCTAA
- Protein Sequence
- MRGEEVDRSRDGWIVGGMIRARTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPMNRGVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSAAPGPPSMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQSCPPPAQLNGGSPPSGANGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00723754;
- 80% Identity
- -