Arep019272.2
Basic Information
- Insect
- Acrobasis repandana
- Gene Symbol
- retn
- Assembly
- GCA_963576875.1
- Location
- OY756231.1:7363138-7372053[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-20 2e-16 61.1 0.0 15 89 12 84 4 84 0.91 2 2 5.8 1.8e+04 -2.9 0.0 25 38 215 228 178 229 0.60
Sequence Information
- Coding Sequence
- ATGAGCTATGTTTTCGTAAAGTCGATGTTTTACAACAGCAgCACTCCAATCAACCGGCTTCCGATCATGGCCAAGTCCGTTCTGGACCTGTACGAGCTGTACAATCTCGTCATCGCCCGGGGCGGCCTTGTGGAGGTCATCAACAAGAAGCTCTGGCAAGAGATCATCAAGGGACTCCGGCTTCCTTCGTCTATCACCTCGGCGGCTTTCACTCTAAGGACACAATACATGAAGTACCTCTACGATTACGAGTGTGAGAAGAAGAACCTGTCAACCCGTAGTGAGCTGGACGCGGCCATCGAGGGCAACAAGAGAGAGGGGCGCAGGGCTTCTGGCCAGTACGATGCACAGGCGGCTCTCGCTATGCCACCCCTGAGCCGCGGCGTCCCTGCCTCGCTCGCACAGCTCTCCCAGCACATGCAACCCCTTTCACTCTCCCTCGGAGGGGGTGTCGGGGGGGTGCCGCGCCTGCCCCCGCTGCCCCCGCACGCCCCGCACATCTCCCAACACGACATAGAGTACAGAGTGCGGGAGTACATGAAGATGATACAACAACAGAGAGAGCTCATGAGGAATGGCTCTGAGTCCCCGCCCGGCAGCGGCGCGCCGATGATGTCCCCTCGCGACGCCGCCGCACTCAGTGCCATCGACGTCTCTCGGCTCACGCTGTGGTCCCTCTAcaacaacaataacaacaacaGCCCGCAACCTGACTTGGAACCACAACGTGAGGCCCTAAACTTAAGTGAAAGTCCAAACTCCAGCGTAAGCGGTGGCAAGCGAGAAGCGTGCCGCTCGCCCCCTCCCCCGGCCAAGAGACGCACTCCCCGGCCCGTGTCCCCCCGCGTGTCACCGCCGCACACGCCGCACACGCCAAGCGAGCGGAGCACGCCTAACATGCCGCGCGCGTGCATGCCGCAGTCGCAAATCAATGGGACGCCCACCAATGGGGTCAATGGAGCAGCGTTCAAGATTACTACTAGAGGCGACGCAACCACTGGAGACCAGCAACTCGTGGTTTCAATAGAACTGAATGGAGTTACATACGAAGGCGTCCTCTTCCCTTCCCAGAACGGCAGCGGCCAGAATGGTCACAGGCAGATGGTCTCTTAA
- Protein Sequence
- MSYVFVKSMFYNSSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSGAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSVSGGKREACRSPPPPAKRRTPRPVSPRVSPPHTPHTPSERSTPNMPRACMPQSQINGTPTNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00007792;
- 80% Identity
- -