Tvir018128.2
Basic Information
- Insect
- Tortrix viridana
- Gene Symbol
- retn
- Assembly
- GCA_963241965.1
- Location
- OY725187.1:8528719-8536210[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-20 1.9e-16 60.9 0.0 16 89 7 78 4 78 0.95 2 2 4.2 1.3e+04 -2.7 0.0 25 38 205 218 167 219 0.61
Sequence Information
- Coding Sequence
- ATGGTGATCCGCACCGTTACCGGCACGCCGATAAACCGACTGCCCATCATGGCGAAGTCGGTGCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGGCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGCGCCTGCCCAGCTCCATCACCTCTGCTGCCTTTACTCTGCGCACACAATACATGAAGTACCTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCGACTCGCAGCGAGCTGGACGCGGCCATCGAAGGCAACAAGCGCGAAGGTCGGCGCGCTTCTGGACAGTATGATGCGCAAGCGGCTCTGGCCATGCCACCATTGTCGCGGGTGCCGGCGTCGCTGGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTCGGCGGCGTGCCGCGCctgccgccgctgccgccgcacgcgccgcaccTGTCGCAGCACGACCTGGAGTACCGCGTGCGCGAGTACATGAAGATGATACAGCAGCAGCGGGAGTTGATGAGGAATGGGTCGGAGTCTCCCCCGGGCTCGGGCCCGACGCCGATGATGTCGCCGCGCGACGCCGCCGCGCTCAGCGCCATCGACGTGTCCCGCCTCACTCTGTGGTCGCtctacaacaacaacaacaacagccCACAGCCCGACCTCGAGCCGCAACGCGAGGCGCTGAACCTGAGCGAGAGCCCCAACTCGTCGCTGGGCGGCGTGAAGCGCGAGGCGtgccgctcgccgccgccgcccgccaagCGCCGCACGCCGCGGCCCGCCTCGCCGCCGCccgagccgcgcgcgcccgaACACAACGCCAACGGCGTCAATGGGGCAGCTTTCAAGATTACGACCAGAGGAGACGCGAGCACAGGCGACCAGCAGCTGGTAGTCTCCATCGAGTTAAATGGCGTCACGTACGAGGGCGTGCTGTTTCCCTCACAGAACAGCGGCCAGAACGGACACCGGCAGATGGTATCTTAA
- Protein Sequence
- MVIRTVTGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHLSQHDLEYRVREYMKMIQQQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLGGVKREACRSPPPPAKRRTPRPASPPPEPRAPEHNANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -