Cbeh019804.2
Basic Information
- Insect
- Colias behrii
- Gene Symbol
- retn
- Assembly
- GCA_029959075.1
- Location
- JARWMB010000018.1:4140998-4146654[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-20 4.2e-17 63.3 0.0 12 89 5 80 2 80 0.95 2 2 9 2.1e+04 -3.1 0.0 25 38 201 214 167 215 0.64
Sequence Information
- Coding Sequence
- ATGTCGCGAGGGTTCTTACAATATGACGGAACCCCAATAAACCGGCTGCCCATAATGGCCAAGTCAGTGCTGGACCTGTACGAGCTATACAACCTGGTGATAGCGCGCGGCGGCCTGGTGGAGGTGATCAACAAGAAGCTCTGGCAGGAGATCATCAAGGGGCTGCGGCTGCCATCGTCCATCACCTCCGCGGCGTTCACTTTACGGACACAATACATGAAGTACCTATATGACTACGAGTGCGAGAAGAAGAACCTGTCAACCAGGAGCGAGTTGGACGCGGCCATAGAGGGCAACAAGCGGGAGGGCCGCCGCGCCTCCGGGCAATATGACGCCCAGGCGGCATTGTCTATGCCGTCACTAAACCGCGGGGTACCGGCCTCCCTCGCGCAGCTATCCCACATGCAGCCGCTGTCGCTGTCGCTGGGCGGCGTGCCGCGCCTGCCGCCGCTGCCGCACGCGCCGCACGTGCAGCACGACATCGAGTACCGCGTGCGCGAGTACATGAAGATGATACAGCAGCAGCGGGAGCTCATACGCAACGGTTCAGAGTCTCCCCCCGGCGCCCCGATGGTGTCTCCCCGCGACGCGGCGCTGTCCGCCATCGACGTGTCGCGTCTGACACTATGGTCTCTCTACAATAATAACAACAACAGCCCGCAACCAGACCTTGAACCTCAACGAGAGGCGCTGAACCTGAGCGAGAGCCCGAACTCGACTAACGGCGTGAAGCGCGAGGCGTGCCGCTCGCCCCCCCCGCCGGCCAAGCGCCGCACCCCGCGCCCCCCCTCCCCGCGCTCGCCCCACGGCCACTCCCCCCGCGCCCCGCACTCGCCCTCGCCCCGCTCCCCCCGCTCGCCGCGCTCCCCGCGCTCGCCCGCGCGCGAAGACAAGCACGCGCACCTCAATGGGGCTGCGAATGGTGTGAGCGGCGCTGCGTTTAAGATCTCTACGAGAGGTGACGCAAGCACAGGCGATCAGAAACTGGTGGTATCCATCGAGCTCAATGGTGTAACATACGAAGGAGTACTATTCCCATCACAAAACGGAAACGGCCAGAGCAACCATCGGCAAATGGTCTCTTAA
- Protein Sequence
- MSRGFLQYDGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPSLNRGVPASLAQLSHMQPLSLSLGGVPRLPPLPHAPHVQHDIEYRVREYMKMIQQQRELIRNGSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSTNGVKREACRSPPPPAKRRTPRPPSPRSPHGHSPRAPHSPSPRSPRSPRSPRSPAREDKHAHLNGAANGVSGAAFKISTRGDASTGDQKLVVSIELNGVTYEGVLFPSQNGNGQSNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- -
- 80% Identity
- -