Prec024180.2
Basic Information
- Insect
- Pasiphila rectangulata
- Gene Symbol
- retn
- Assembly
- GCA_963082625.1
- Location
- OY720252.1:6594883-6604402[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-20 1.4e-16 61.8 0.0 15 89 19 91 8 91 0.94 2 2 5.2 2.1e+04 -2.9 0.0 25 38 223 236 185 237 0.66
Sequence Information
- Coding Sequence
- ATGACGTGCCTAATGCGGAGCAGCCTGATGATTGGGCTGATTTATCGGCGGAAGGAAGCAGGAACACCAATTAACCGGCTGCCTATTATGGCCAAGTCAGTTCTGGACCTGTATGAGCTGTACAACCTTGTGATCGCCCGCGGTGGTCTGGTAGAGGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGACTCCGACTGCCGTCTTCTATCACATCTGCAGCCTTTACTTTACGCACACAATACATGAAATACCTGTACGACTACGAATGCGAGAAGAAGAACCTCTCTACCAGAAGTGAGCTGGACGCAGCCATCGAGGGCAACAAGCGTGAAGGCAGGCGGGCGTCGGGGCAGTACGACGCGCAAGCTGCTCTTGGCATGCCTCCCATGAACCGCGGGGTCCCCGCCTCGCTCGCCCAGCTGTCCCAGCACATGCAgcctctctctctctcgctcGGAGGGGGGGTGGGCGTGCCTCGCCTGCCGCCGTTGCCGCCGCACGCGCCTCACATCTCGCAACACGACATCGAGTACAGGGTCCGAGAATATATGAAGATGATACAGACACAACGCGAGCTGATGAGGAATGGTTCGGAATCCCCCCCTAGCGCGTCCAACGGCCCCACCCCCATGATGTCGCCCCGCGACGCCGCCCTCAGCGCGATCGACGTCTCCCGCCTCACTCTCTGGTCGCTCTACAACAACAATAACAACAGCCCCGCGCCAGACCTGGAGCCACAACGCGAGGCGCTAAACCTCAGCGAGAGCCCAAACTCCAGCACAAGCGGCGGCAAGCGAGAGGCCTGCCGCTCCCCCCCACCGCCGGCGAAGCGCCGCACCCCTCTGCCCCCTTCGCCGCGGCTACCCTCCCCCCCGCGGCAGGCctgtgcgccggcgccggcggtaAATGGAACTAATGGAGCGAATGGCGCAGCTTTCAAGATTACGACTAGAGGTGATGCAAACACAGGAGACCAGCAGCTCGTCGTTTCAATAGAACTGAACGGCGTCACCTATGAAGGCGTTCTCTTCCCCTCACAAAACGGCAGCGAACAGAACACCCACAGGCAAATGGTTTCCTAA
- Protein Sequence
- MTCLMRSSLMIGLIYRRKEAGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPMNRGVPASLAQLSQHMQPLSLSLGGGVGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSASNGPTPMMSPRDAALSAIDVSRLTLWSLYNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPLPPSPRLPSPPRQACAPAPAVNGTNGANGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGSEQNTHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -