Hmis010085.1
Basic Information
- Insect
- Hypolimnas misippus
- Gene Symbol
- retn
- Assembly
- GCA_008963455.1
- Location
- JBBEEQ010000011.1:8979992-8987003[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 3.1e-16 60.3 0.0 17 89 19 89 11 89 0.95 2 2 4.1 1.2e+04 -2.4 0.0 25 38 206 229 180 230 0.51
Sequence Information
- Coding Sequence
- ATGTCGATTCGATCGATTATAGCTCGTGTCGTCGAGCGCGGACGGCATCTGATAGGTACACCAATCAACAGACTTCCCATTATGGCGAAGTCCGTGCTTGACCTCTACGAGCTATACAACCTGGTGATAGCCCGCGGCGGCCTTGTGGAGGTCATCAACAAGAAACTCTGGCAGGAAATCATCAAGGGTCTGCGACTGCCTTCCTCCATCACTTCGGCCGCCTTCACTTTACGCACACAATACATGAAGTATCTTTACGATTACGAGTGCGAGAAGAAGAATCTGTCAACTAGAAGCGAGCTGGACGCTGCTATTGAGGGCAACAAGCGCGAGGGACGTCGGGCATCTGGGCAGTATGATGCGCAGGCCGCTTTGGCCATGCCACAACTCAACAGAGTGCCAGCGTCTCTCGCCCAACTAACCCAACACATGCAGCCTCTCTCCCTATCTCTTGGTGGAGGGGTCGGGGGGGTGCCACGTCTACCGCCTTTACCACCTCACGCACCACACATCTCCCAACACGATATCGAGTTCCGCGTCCGCGAATATATGAAGATGATACAACAACAACGCGAGCTAATCAGGAATGGATCAGAATCTCCCCCAAGTGCTCCGATGGTGTCGCCTCGTGATGCGGCTCTGTCCGCTATTGATGTATCGCGACTCACTCTTTGGTCGTTATATAACAACAACAATAACAGTCCACAACCAGATCTCGAACCACAGCgCGAGGCCCTAAATCTAAGCGAGAGTCCCAATTCAAGCGTGACCGGCATCAAGCGCGAGGCGTGCCGCTCCCCTCCCCCCGCGGCCAAGCGCCGCACCCCGCGCCCGCCCTCCCCCGCGCCTGCGCCCGCTTCGCCGCACACTCCGCCGCGCCCGCACGCGCACCTCAATGGCAACTCCAATGGGGTCCATGGTGCCGCTTTCAAGATTACCACAAGAGGTGACGCTACCACCGGCGACCAACAGCTCGTAGTGTCTATCGAACTCAACGGCGTGACATACGAAGGCGTCCTTTTCCCATCACAGAACGGCAACGGCCAGAACGGACATCGACAAATGGTCTCCTAA
- Protein Sequence
- MSIRSIIARVVERGRHLIGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPQLNRVPASLAQLTQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEFRVREYMKMIQQQRELIRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSVTGIKREACRSPPPAAKRRTPRPPSPAPAPASPHTPPRPHAHLNGNSNGVHGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00642129;
- 80% Identity
- -