Cdea030310.2
Basic Information
- Insect
- Coleophora deauratella
- Gene Symbol
- retn
- Assembly
- GCA_958295455.1
- Location
- OY282407.1:10017848-10031328[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-20 3.1e-16 60.8 0.0 16 89 3 74 1 74 0.95 2 2 9.2 4e+04 -3.7 0.0 26 38 207 219 191 220 0.74
Sequence Information
- Coding Sequence
- ATGATTTCAGGCACACCAATCAACCGCCTGCCAATAATGGCCAAGTCGGTGTTGGACCTATACGAGCTATATAACTTGGTGATCGCTCGCGGGGGACTGGTGGAGGTGATCAATAAGAAGCTGTGGCAGGAGATCATCAAGGGACTCCGACTGCCGTCATCTATCACCTCGGCGGCATTCACACTGAGGACACAGTACATGAAGTACTTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCTACCAGGAGTGAGCTGGACGCAGCCATCGAGGGCAACAAGCGAGAAGGCAGGCGAGCCTCCGGCCAGTACGACGCGCAGGCTGCATTAGCCATGCCGCCTCTGAACCGCGGCGTGCCGGCGTCGCTGGCGCAGCTCACCCAGCACATGCAgccgctgtcgctgtcgctgggGGGCGCCGTGGCGGGCGTGCCGCGcctgccgccgctgccgccgcacGCGCCGCACCTCTCGCAGCACGACATAGAGTACCGAGTCAGAGAGTACATGAAGATGATACAGACGCAGAGGGAGCTAATGAGGAATGGATCGGAGTCGCCGCCGGGCAGCGGGGCGCCCCCCATGATGTCGCCCCGCGACGCGGCCGCCCTCAGCGCCATCGACGTCTCCCGCCTCACGCTGTGGTCGCTctataacaacaacaacaacagccCGCAAGACCTGGAGCCGCAGAGAGAGGCCCTGAACTTAAGCGAAAGCCCCAACTCCAGCATAGGCATCAAGAGGGAAGCCTGCCGCTCCCCCCCTCCCGCGGCCAAGCGGCGCACCCCGCGGCCGGCCTCCCCCCGCGCCTCGCCCCCCCGCCCCGCCAGCCTGCCCTCGCAGCATCCGCAGGTCAACGGTGGCCAACCTAATGGAGTGAACGGGGCTGCCTTCAAGATCACAACCAGAGGTGACGCCTCAACAGGAGACCAGCAGCTAGTCGTCTCGATAGAGTTGAACGGAGTCACCTACGAAGGCGTGCTCTTCCCCTCCCAAAGCTCCAACAACCAAAACGGACATCGACAAATGGTCTCTTAA
- Protein Sequence
- MISGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLTQHMQPLSLSLGGAVAGVPRLPPLPPHAPHLSQHDIEYRVREYMKMIQTQRELMRNGSESPPGSGAPPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQDLEPQREALNLSESPNSSIGIKREACRSPPPAAKRRTPRPASPRASPPRPASLPSQHPQVNGGQPNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQSSNNQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -