Lrea014882.1
Basic Information
- Insect
- Leptidea reali
- Gene Symbol
- retn_1
- Assembly
- GCA_949711725.1
- Location
- CATIXN010000011.1:17817295-17827369[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-20 2.4e-16 61.0 0.0 16 89 11 82 4 82 0.94 2 2 5.3 2.1e+04 -2.9 0.0 25 38 210 223 175 224 0.61
Sequence Information
- Coding Sequence
- ATGCTTCCAGAAATGCTGGCAGCCCTAGGTGAAGGCACACCAATAAACCGACTGCCTATAATGGCGAAGTCAGTACTGGATCTCTACGAGTTGTACAACTTGGTGATTGCCCGAGGGGGTCTGGTGGAGGTCATCAACAAGAAGCTCTGGCAGGAAATTATAAAGGGTCTCCGGCTGCCATCCTCCATCACTTCGGCTGCATTCACACTCAGAACACAgTATATGAAATACTTATACGACTACGAGTGCGAGAAGAAGAACTTGTCGACGCGGAGTGAGCTGGACGCCGCCATAGAGGGCAATAAGCGAGAGGGCCGGCGTGCTTCCGGGCAGTACGATGCGCAGGCGGCTCTCTCTATGCCCCCCTTGAACCGTGGAGTGCCCGCGTCTCTGGCGCAGTTGTCCCAGCACATGCAGCCGCTCTCCCTCTCGCTGGGGGGCGCGGTGGGAGGTGTCCCCCGCCTGCCCCCACTGCCGCCGCACGCGCCTCACATCACGCAGCATGACATAGAGTACCGCGTGCGGGAGTACATGAAGATGATCCAGCAGCAACGGGAACTAATCAGAAATGGTTCGGAGTCACCGCCTGGCGCTCCCATGGTGTCCCCGCGGGACGCCGCCCTGTCTGCTATCGACGTGTCCCGTCTGACTCTGTGGTCTCTCTACAACAATAACAACAATACCTGCCCACAGCCAGACCTCGAGCCACAACGAGAGGCGCTAAATTTAAGTGAGAGCCCCAACTCAAGTAACGGTATCAAGCGCGAGGCGTGTCGCTCCCCCCCTCCGCCCGCTAAACGCCGCACCCCCCGCCCGCCCTCGCCCCCTCGCTCGCCCCCCGACACTAAGCCCGCCGTACACGCAGCGCATCTGAACGGCAACGCGAACGGAATCAGTGGAGCCGCCTTCAAAATATCCACGAgagGTGACGCGAGCACGGGTGATCAGAAATTAGTTGTATCAATAGAACTGAATGGAGTTACCTATGAAGGCGTCCTGTTCCCCTCACAAACCGGAAATGGACAGAATAACCATCGGCAAATGGTCTCTTAA
- Protein Sequence
- MLPEMLAALGEGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPPLNRGVPASLAQLSQHMQPLSLSLGGAVGGVPRLPPLPPHAPHITQHDIEYRVREYMKMIQQQRELIRNGSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNTCPQPDLEPQREALNLSESPNSSNGIKREACRSPPPPAKRRTPRPPSPPRSPPDTKPAVHAAHLNGNANGISGAAFKISTRGDASTGDQKLVVSIELNGVTYEGVLFPSQTGNGQNNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00874235;
- 80% Identity
- iTF_00874235; iTF_00875936;