Aeph007642.1
Basic Information
- Insect
- Acentria ephemerella
- Gene Symbol
- retn
- Assembly
- GCA_943193655.1
- Location
- CALPDL010000045.1:2265-11054[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-20 4e-17 62.7 0.0 14 89 71 144 62 144 0.95
Sequence Information
- Coding Sequence
- ATGAGCGGCGGGCGTGAGCTCTCGGTGGCCGCCTATTGGCCGGACGCGGGGTTGAGGGGCTATAAGGGCCTTGATACAGCTCTCGATAAGCGTCCAGTAACGGCGTGCATCGTAAACGCGCGATCTGACGCGCTTGCGCACCGCATAAATCATCGATCGCGCGATCCGGCGCGATTTACCACGCGGACAGTTTACGGCCCTTACCAAGTACGCCGTAAAGGCACTCCTATAAACCGACTCCCAATTATGGCGAAGTCAGTGTTGGACCTGTACGAGCTCTACAACCTGGTGATAGCGCGTGGTGGGCTCGTCGAGGTTATCAACAAGAAACTATGGCAAGAAATCATTAAAGGACTCCGACTACCCTCCTCGATAACATCAGCGGCTTTCACTCTTCGCACACAGTATATGAAATATTTGTACGATTACGAATGTGAAAAAAAGAACCTGTCGACTAGAAGTGAGCTGGATGCTGCCATAGAAGGAAATAAAAGGGAGGGAAGACGCGCCTCTGGACAGTATGATGCGCAAGCGGCGTTAGCCATGCCCCCTTTAAACCGTGGTGTGCCAGCATCGTTAGCCCAACTGTCCCAACACATGCAGCCGCTGTCTCTCTCGTTGGGGGGAGGAGTGGGCGGGGTACCGCGGCTTCCTCCCTTACCGCCGCACGCGCCGCACATCTCGCAGCACGACATTGAGTACCGTGTGAGGGAGTACATGAAGATGATACAGCAGCAACGTGAGCTAATGAGGAATGGCTCCGAATCCCCCCCGGGTTCAAACGGGCCCGCGCCCATAATGTCGCCCCGTGACGCAGCCGCCCTCAGCGCGATCGACGTCTCACGCCTAACTCTCTGGTCCCTCTATAACAACAACAATAACAGTCCTCAGCCAGATCTGGAGCCGCAACGCGAGGCGTTAAACCTCAGTGAGAGTCCAAACTCCAGTGGTAGTGGAGGCAAGCGGGAAGCGTGCCGCTCGCCGCTGCCGCCCGCCAAACGCCGCACACCGCGACCTCCCTCGCCGCGCGCCCCCTCTCCCCCTCGCTGTCCGCCAGCGACTGTCAACGGGAACACGCCGGCCAGCGGAGTGAATGGCGCAGCATTTAAAATTACTACCAGAGGTGATGCCAACACAGGAGACCAACAACTCGTCGTATCGATAGAACTAAACGGTGTCACATATGAAGGCGTACTATTTCCGTCACAAAATGAAAAGGGACAGAACGGCCACAGACAAATGGTCTCTTAG
- Protein Sequence
- MSGGRELSVAAYWPDAGLRGYKGLDTALDKRPVTACIVNARSDALAHRINHRSRDPARFTTRTVYGPYQVRRKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSGSGGKREACRSPLPPAKRRTPRPPSPRAPSPPRCPPATVNGNTPASGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNEKGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_01081369; iTF_00431914; iTF_00278898; iTF_01333512; iTF_00681450; iTF_00683108; iTF_00075243; iTF_01331211; iTF_00076236; iTF_00960718; iTF_01180111; iTF_01073391; iTF_01179287; iTF_00382354; iTF_01282006; iTF_01279050; iTF_00074263; iTF_00034490; iTF_00284312; iTF_00447951; iTF_00035424;
- 80% Identity
- -