Ahol029174.1
Basic Information
- Insect
- Acleris holmiana
- Gene Symbol
- retn
- Assembly
- GCA_949316455.1
- Location
- OX438779.1:7241191-7250189[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-20 2e-16 61.4 0.0 16 89 5 76 2 76 0.95 2 2 4.6 2e+04 -2.7 0.0 25 38 203 216 165 217 0.61
Sequence Information
- Coding Sequence
- ATGTTGGTTGTTAAAGGCACGCCGATTAACCGACTGCCGATCATGGCGAAGTCGGTGCTGGACCTGTATGAGTTGTACAACCTGGTGATCGCGCGCGGCGGGCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTGCGCCTGCCCAGCTCCATCACCTCTGCTGCCTTTACTCTGCGCACACAATACATGAAGTACCTGTATGATTACGAGTGCGAGAAGAAGAACCTGTCGACTCGCAGCGAGCTGGACGCGGCCATCGAGGGTAACAAGCGCGAGGGTCGGCGTGCTTCGGGACAGTACGATGCGCAAGCGGCTCTAGCCATGCCGCCGCTGTCGCGGGTGCCGGCGTCGCTGGCGCAGCTCTCGCAGCACATGCAGCCGCTGTCCCTCTCGCTCGGCGGCGTGCCGCgcctgccgccgctgccgccgcacGCGCCGCACCTGTCCCAGCACGACCTGGAGTACCGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGCGGGAGTTGATGAGAAATGGGTCGGAGTCTCCGCCGGGCTCGGGCCCGACGCCGATGATGTCGCCGCGCGACGCCGCCGCGCTCAGCGCCATCGACGTGTCGCGCCTCACGCTGTGGTCGctctacaacaacaacaacaacagcccGCAGCCAGACCTGGAGCCGCAACGCGAGGCGCTGAATCTGAGCGAGAGCCCCAACTCGTCGCTGGGCGGCGTGAAGCGCGAGGCGTgccgctcgccgccgccgcccgccaaGCGCCGCACGCCGCGCCCGGCCTCGCCGCCGCCCGAGCGCGCCCTGCCCGACCACGGCTCCAACGGGGTCAACGGGGCGGCTTTCAAGATTACCACCAGAGGAGACGCGAGCACAGGCGACCAGCAGCTGGTGGTCTCCATCGAGTTGAACGGCGTCACGTATGAGGGCGTACTGTTCCCCTCACAGAACAGCGGCCAGAACGGACACCGGCAGATGGTCTCCTAA
- Protein Sequence
- MLVVKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHLSQHDLEYRVREYMKMIQQQRELMRNGSESPPGSGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLGGVKREACRSPPPPAKRRTPRPASPPPERALPDHGSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -