Etru016834.1
Basic Information
- Insect
- Eudonia truncicolella
- Gene Symbol
- retn
- Assembly
- GCA_949315975.1
- Location
- OX438841.1:5694797-5707748[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-19 7.9e-16 58.9 0.0 18 89 24 93 18 93 0.94 2 2 5.7 1.8e+04 -3.2 0.0 25 38 227 240 189 241 0.66
Sequence Information
- Coding Sequence
- ATGCGGCGGAGGGTATTCAGCCACGCTATTGGTCAGGCGTTCCCCAAGGTTTGGTTCTCGGGCCCCAGAACTCCTATTAATCGGTTGCCCATCATGGCCAAGTCTGTGCTGgacctgtacgagctgtacaacTTGGTGATCGCGCGCGGAGGACTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTCAGGCTGCCGTCGTCGATCACATCTGCTGCGTTCACTCTTCGTACACAATATATGAAGTATCTCTACGACTATGAGTGCGAGAAGAAAAACCTGTCTACCAGGAGTGAGCTAGACGCTGCCATAGAAGGCAACAAGAGGGAGGGCAGGCGAGCCTCCGGCCAATACGATGCGCAGGCGGCGCTAGCAATGCCCCCCCTGAGCCGCGTGCCGGCGTCGCTCGCGCAGCTCTCGCAACACATGCAGCCCCTCTCGCTCTCCCTGGGAGGGGTCGGGGGGGTCGGGGGGGTCCCCCGTCTTCCTCCCCTGCCGCCGCATGCGCCTCACATCTCCCAGCACGACATCGAGTACCGCGTGAGGGAATACATGAAGATGATACAGCAGCAGCGCGAGCTAATGAGGAACGGTTCCGAATCGCCCCCAGGCTCAAACGGCCCCGCCCCCATAATGTCGCCACGCGACGCCGCCGCTCTCAGCGCGATCGACGTCTCCCGCCTAACCCTGTGGTCCctctacaacaacaacaacaacagcccCCAGCCCGACCTGGAGCCACAACGCGAGGCACTCAACCTCAGCGAGAGCCCCAACTCCACGTTGAGCGGGGGCAAGCGCGAGGCGTGCCGCTCCCCCCCGCCGCCCGCCAAGCGACGCACCCCGCGCCCGCCCTCCCCGCGCGCGCCCTCCCCGCCCCGCTGCCCACCACAAGTCAACGGCAGCAGCCCGCCCAACGGCGTGAATGGAGCTGCCTTCAAAATTACTACTAGAGGCGACGCAAGCACAGGTGACCAGCAACTCGTGGTGTCGATAGAGCTTAACGGAGTAACATACGAAGGAGTCCTATTCCCATCACAGACCGGGAGCGGCCAGAACGGTCACAACAGGCAAATGGTTTCTTAA
- Protein Sequence
- MRRRVFSHAIGQAFPKVWFSGPRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRVPASLAQLSQHMQPLSLSLGGVGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSTLSGGKREACRSPPPPAKRRTPRPPSPRAPSPPRCPPQVNGSSPPNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQTGSGQNGHNRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -