Eelu029069.2
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- retn
- Assembly
- GCA_018467065.1
- Location
- CM031582.1:11081495-11089191[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-21 2.7e-17 64.4 0.0 14 89 31 104 17 104 0.95 2 2 7 3.5e+04 -3.2 0.0 25 38 235 248 199 249 0.64
Sequence Information
- Coding Sequence
- ATGCCATTGAGCACTCCGTCCTTGTTTGCTTGCAAACTTCAAATAATTCTCGTCAACGTATCCAGCTCCTCAATTCCGCGCATCATCCCTGAACAGCGCGGCACTCCAATTAACCGGCTGCCGATCATGGCCAAGTCAGTCTTGGACTTGTACGAGCTGTACAACCTGGTAATCGCTCGAGGTGGCCTCGTCGAGGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGGCTTCGGCTGCCTTCCTCCATCACCTCCGCGGCTTTCACTTTGAGGACACAatacatGAAGTACCTCTATGACTACGAGTGTGAGAAAAAGAATTTGTCAACTCGTAGCGAGCTGGACGCTGCCATCGAAGGCAACAAGAGAGAAGGACGCAGGGCATCCGGGCAGTATGACGCCCAGGCGGCTCTCGCTATGCCACCACTAGGGCGCGGTGTTCCCGCCTCGCTTGCACAACTGTCGCAGCACATGCAGCCTCTCTCGCTCTCGCTCGGCGGAGGGGTGACGGGGGTGCCGCGGCTGCCCCCCCTGCCCCCGCACGCGCCGCACATCTCCCAGCACGACATAGAGTACAGAGTCAGAGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGGAATGGCTCGGAGTCGCCCCCGGGGAGCGCCGCCCCGATCATGTCCCCGCGCGACGCCGCCGCCCTCAGCGCCATCGACGTCTCGCGCTTGACGCTGTGGTCGctctacaacaacaacaacaacaacagtcCCCAGCCCGACTTGGAACCACAACGCGAAGCCCTAAACCTTAGCGAGAGCCCGAACTCGAGCTTGAGCGGCAAGCGCGAGGCGTGCCGCTCCCCGCCGCCCCCCGCCAAGCGGCGCACCCCCCGCCCCGCGTCCCCGCGCTCCCCGCACACGCCCGCCAGCGAGCGCAGCACGCCGAGCATGCCGCGCGCCTGTCTGCCACAGTCTCAGATCAACGGTACACCAACCAATGGGGTCAATGGGGCCGCGTTTAAGATTACTACTAGAGgaGATGCGAGCACAGGCGACCAGCAACTCGTAGTTTCAATAGAACTCAACGGAGTCACATACGAAGGGGTTCTCTTCCCTTCCCAGAACGGCAGTGGTCAAAATGGCCACAGGCAGATGGTCTCTTAA
- Protein Sequence
- MPLSTPSLFACKLQIILVNVSSSSIPRIIPEQRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLGRGVPASLAQLSQHMQPLSLSLGGGVTGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSAAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSLSGKREACRSPPPPAKRRTPRPASPRSPHTPASERSTPSMPRACLPQSQINGTPTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00007792;
- 80% Identity
- -