Ndro019922.1
Basic Information
- Insect
- Notodonta dromedarius
- Gene Symbol
- retn
- Assembly
- GCA_905147325.1
- Location
- LR990175.1:7507558-7513278[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-20 2.1e-16 60.3 0.0 17 89 2 72 1 72 0.95 2 2 8 2.1e+04 -3.9 0.0 26 38 205 217 192 218 0.75
Sequence Information
- Coding Sequence
- ATGGGCACCCCCATCAACCGGTTGCCGATAATGGCCAAGTCAGTCCTGGATCTCTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGCCTAGTCGAGGTGATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGGCTTCGGCTGCCGTCGTCCATCACCTCCGCCGCTTTCACATTACGCACACAGTACATGAAGTACTTGTACGATTACGAGTGTGAGAAAAAGAACCTGTCCACGCGGAGTGAGCTGGACGCCGCCATCGAAGGCAACAAACGCGAGGGGCGGCGCGCCTCGGGACAGTACGACGCACAGGCTGCACTAGCTATGCCACCGCTGAGCCGCGTGCCAGCGTCCCTGGCCCAACTGTCCCAGCACATGCAGCCCCTCTCGCTGTCCCTGGGCGGGGGGGTGGCGGGCGTGCCGCGCCTCCCGCCCCTGCCGCCCCACGCCCCGCACATCTCCCAGCACGACATAGAGTACAGAGTACGCGAGTACATGAAGATGATACAGCAGCAACGGGAGCTCATGAGGAATGGTTCCGAGTCGCCGCCGGGCGTAAACGGACCCGCACCCGTCATGTCGCCCCGCGACGCCGCCGCGCTCAGCGCCATCGACGTATCCCGCCTCACACTATGGTCTCTGTACAACAATAACAATAATAACAGCCCACAGCCTGATCTGGAACCACAACGTGAAGCCCTAAACCTAAGCGAGAGTCCAAACTCTAGCCTGAGCGGAGTGAAGCGCGAGGCGTGTCGGTCGCCCGCGCCGCCCGCCAAGCGGCGCACGCCGCGGCCCCTCTCGCCGCGCGCGCCCAGCCCGCCGCGGGCGCGCCTGCCCTCGCCGCCGCACGCGCAGCTCAACGGCTCACCGCCAAGCAATGGCGTCAATGGTGCTGCCTTTAAAATTACTACCAGAGGCGATGCAAGCACAGGGGATCAACAATTGGTCGTGTCAATAGAACTGAACGGAGTCACGTACGAAGGAGTTTTGTTTCCATCACAAAATGGCAACGGACAAAACGGACACAGACAGATGGTATCCTAA
- Protein Sequence
- MGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGVNGPAPVMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSLSGVKREACRSPAPPAKRRTPRPLSPRAPSPPRARLPSPPHAQLNGSPPSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -