Pmel018947.2
Basic Information
- Insect
- Pieris melete
- Gene Symbol
- retn
- Assembly
- GCA_963693345.1
- Location
- CAVNZK010000255.1:476755-480349[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-20 3.4e-17 63.3 0.0 9 89 13 91 7 91 0.93 2 2 7.3 1.3e+04 -2.6 0.0 25 38 215 228 181 230 0.64
Sequence Information
- Coding Sequence
- atgtcaTTCTGTTTGAGAAGTGATAATCAAATGTCAATCAAGCGGACTTGCTTCTCTTCAGGAACGCCTATCAACAGATTACCGATAATGGCGAAGTCTGTGCTGGATCTGTATGAATTGTACAACTTGGTGATAGCTCGTGGTGGATTAGTGGAGGTGATCAACAAGAAACTCTGGCAGGAGATCATCAAGGGACTTCGGCTGCCATCGTCTATCACTTCGGCTGCATTTACACTAAGAACACAATATATGAAGTATTTATACGACTATGAGTGCGAGAAGAAAAACCTGTCAACCCGCAGTGAGCTGGACGCAGCCATCGAGGGCAACAAGCGGGAGGGGCGCCGTGCCTCAGGACAGTACGACGCACAGGCAGCACTCTCTATGCCCCCCCTGAACCGCGGAGTCCCGGCGTCCCTCGCGCAGCTGTCCCAGCACATGCAGCCCCTGTCCCTGTCGCTGGGGGGCACTGTGCCCCGCCTGCCCCCTCTGCCCCCACACGCACCTCATATCTCGCAGCACGACATCGAGTACCGAGTCCGCGAGTACATGAAGATGATACAACAGCAACGCGAGCTTATCAGAAACGgTTCTGAATCACCCCCGGGAGCGCCGATGATGTCTCCCCGCGACGCGTTGTCCGCCATCGACGTGTCGCGTCTCACTCTGTGGTCTCtgtacaacaacaacaacaacagcCCGCAACCGGACATCGAACCGCAACGAGAGGCGTTGAACCTGAGCGAGAGCCCGAACTCCAGTAACGGCGGCATAAAACGCGAGGCCTGCCGCTCCCCCCCTCCGCCGGCCAAGCGCCGCACCCCTCGGCCCCCTTCGCCCGCGCCACGCTCGCCTCCAGACACTAAGCCTATCGCGCACCTCAACGGCAACTCCGGCCTCAACAACGGCGTCAGTGGCGCCGCCTTCAAGATCTCCACTCGGGGTGACGCAAGCACAGGTGATCAAAAACTCGTCGTATCCATAGAGCTCAACGGTGTGACATACGAAGGTGTGCTCTTCCCCTCACAAAACGGAAACGGGCAAAACCACCGACAAATGGTTTCTTAA
- Protein Sequence
- MSFCLRSDNQMSIKRTCFSSGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALSMPPLNRGVPASLAQLSQHMQPLSLSLGGTVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELIRNGSESPPGAPMMSPRDALSAIDVSRLTLWSLYNNNNNSPQPDIEPQREALNLSESPNSSNGGIKREACRSPPPPAKRRTPRPPSPAPRSPPDTKPIAHLNGNSGLNNGVSGAAFKISTRGDASTGDQKLVVSIELNGVTYEGVLFPSQNGNGQNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00642129;
- 80% Identity
- iTF_01202257;