Spav014355.2
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- retn
- Assembly
- GCA_947532125.1
- Location
- OX383911.1:10924849-10936278[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-20 1.4e-16 60.9 0.0 16 89 15 86 10 86 0.94 2 2 7.2 1.2e+04 -3.0 0.0 25 38 219 232 181 233 0.65
Sequence Information
- Coding Sequence
- ATGATTAACTGTAGACAGGAAGACGGATTGACAAATAGTCGTTTAGGTACACCTATAAACCGGTTACCGATTATGGCTAAGTCGGTGTTAGATTTGTACGAGTTGTATAATTTGGTGATCGCGAGGGGAGGTCTCGTCGAGGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGCCTCCGACTGCCATCTTCCATCACGTCTGCTGCCTTCACACTACGCACACAGTATATGAAGTATTTATATGACTATGAATGTGAGAAGAAGAACTTGTCGACTCGCAGCGAGTTGGACGCCGCTATAGAAGGGAACAAACGGGAAGGGAGACGCGCCTCCGGACAATACGACGCACAAGCGGCTCTCGCTATGCCGCCTCTAAGTCGTGGAGTGCCAGCCTCTTTGGCCCAGCTGTCGCAGCACATGCAACCCTTGTCGCTGTCGCTTGGCGGCGGTGTAGCTGGAGTGCCGCGGCTGCCACCATTACCACCGCACGGGCCACACATCTCACAACATGACATCGAATACCGCGTCAGAGAGTACATGAAGATGATACAGCAACAACGGGAACTTATGAGGAACGGATCGGAATCACCGCCGGGCAGTAACGGGCCGACGTCGATGATGTCGCCGCGCGACGCTGCCGCTCTGAGCGCCATCGACGTGTCCCGTCTCACTCTCTGGTCTCTCTACAATAATAACAACAACAGCAGCCCGCAGCCAGACCTCGAGCCGCAACGGGAGGCTTTAAATTTGAGCGAAAGTCCTAACTCGAGTGTGAGTGGCGGTAAGCGCGAGGCTTGTCGGTCGCCGCCGCCGCCCGCGAAGCGCCGCACGCCGCGGCCGGTGTCCCCCCGCCCGCACTCGCCCCCGCCCCCGCCCCGCGCGCCGCCCGCGACGCCGCCGCAGCTGAACGGCGGCACACCCAACGGTGTCAACGGAGCGGCTTTCAAAATCACTACCAGAGGCGATGCCAGCTCGGGCGACCAGCAGCTGGTAGTGTCCATAGAGCTGAACGGGGTAACGTATGAAGGCGTGCTGTTCCCGTCGCAGAGCGGTAACGGGCAAAACGGTCACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MINCRQEDGLTNSRLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHGPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPTSMMSPRDAAALSAIDVSRLTLWSLYNNNNNSSPQPDLEPQREALNLSESPNSSVSGGKREACRSPPPPAKRRTPRPVSPRPHSPPPPPRAPPATPPQLNGGTPNGVNGAAFKITTRGDASSGDQQLVVSIELNGVTYEGVLFPSQSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00113121;
- 80% Identity
- -