Bmor002513.1
Basic Information
- Insect
- Bombyx mori
- Gene Symbol
- retn_1
- Assembly
- GCA_027497135.1
- Location
- CP114950.1:9417201-9425592[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-20 1e-16 61.1 0.0 16 89 8 79 4 79 0.94 2 2 3.1 7.1e+03 -2.5 0.0 25 38 210 223 173 224 0.57
Sequence Information
- Coding Sequence
- ATGTGCCCGAATTATAATATTGATGGTACACCGATTAACCGGTTACCGATTATGGCCAAGTCGGTCCTAGACCTGTACGAGCTGTACAACCTTGTGATAGCACGTGGAGGGCTCGTGGAGGTGATCAACAAGAAACTCTGGCAGGAGATAATTAAGGGACTCCGGCTGCCGTCTTCTATCACGTCCGCTGCCTTCACTTTACGCACTCAATATATGAAATATCTATACGACTATGAATGTGAGAAGAAAAATCTGTCCACGCGCAGCGAGTTGGATGCTGCTATTGAAGGTAACAAGCGCGAGGGAAGACGCGCCTCCGGACAATACGACGCCCAAGCTGCTTTAGCAATGCCGCCATTGAATCGCGGAGTCCCGGCCTCTCTCGCCCAGCTCTCCCAGCACATGCAGCCGCTCTCTCTCTCCCTCGGAGGAGGAGTCGCTGGAGTACCACGTCTACCACCACTGCCTCCACATCCCACTCACATCTCACAACACGATATTGAATACAGAGTAAGGGAATATATGAAGATGATACAACAACAGCGGGAGATGATGAGGAATGGTTCAGAATCGCCACCAGGCGGTAACGGGCCCACTCCTATGATCTCGCCGCGTGATGCCCTTAACGCTATTGATGTGTCTCGACTGACCCTTTGGTCTCTGTACAATAACAACAACCATAGCCCGCAGCCGGAACTAGAACCGCAACGAGAGGCCTTGAACCTTAGCGAGAGTCCGAATTCTATCACCAGCGGCTGCAAGCGTGAAGCGTGCCGCAACACACCCCAGGTCAACGGCTCCAACGGAATGAACGGGGCTGCTGCCTTTAAAATCACTACTAAAGGTGACGCCAGCACTGGGGACCAGCAACTCGTAGTCTCCATCGAACTGAATGGCGTCACGTACGAAGGCGTATTGTTCCCATCGCAAAACAGCAACGGTCAGAACGGGCACAGGCAAATGGTGTCCTAG
- Protein Sequence
- MCPNYNIDGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHPTHISQHDIEYRVREYMKMIQQQREMMRNGSESPPGGNGPTPMISPRDALNAIDVSRLTLWSLYNNNNHSPQPELEPQREALNLSESPNSITSGCKREACRNTPQVNGSNGMNGAAAFKITTKGDASTGDQQLVVSIELNGVTYEGVLFPSQNSNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- -
- 80% Identity
- -