Mvio016862.1
Basic Information
- Insect
- Megathymus violae
- Gene Symbol
- retn
- Assembly
- GCA_003671415.1
- Location
- PDGT01000017.1:3828475-3838282[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-20 1.3e-16 61.3 0.0 14 89 2 75 1 75 0.94 2 2 1.3 4.6e+03 -1.3 0.0 10 38 173 211 163 217 0.54
Sequence Information
- Coding Sequence
- ATGAGCTTACGTCGCACACCTATAAACAGGCTGCCCATAATGGCCAAGTCTGTGCTGGACCTGTACGAGCTGTATAATCTAGTGATCGCGCGCGGAGGCCTCGTTGAAGTCATCAACAAGAAACTGTGGCAGGAGATCATCAAAGGCCTCCGCCTGCCGTCCTCGATCACTTCCGCAGCCTTCACTCTTCGTACTCAATACATGAAGTACCTGTATGACTACGAGTGCGAAAAGAAGAATCTGTCTACCCGCAGCGAGCTTGACGCGGCCATTGAGGGCAATAAACGGGAAGGACGCCGCGCCTCCGGACAGTATGACGCGCAAGCCGCGTTGGCTATGCCACCTCTAAACCGCGGCGTACCGGCATCCCTCGCGCAGTTGTCGCAGCACATGCAGCCGCTCTCTCTCTCCCTGGGCGGCGTTCCGCGACTCCCACCGCTGCCACCGCACGCGCCGCATGTCACACATGATATTGAGTACCGCGTTCGGGAGTATATGAAGATGATCCAACAGCAACGCGAATTGATGAGAAATGGATCGGAATCTCCACCCAGCGCTCCGATGGTATCTCCCCGGGACGCTGCACTCTCCGCCATCGACGTCTCGCGCTTGACTCTCTGGTCGCTGTACAACAACAACAACAATAACAACAACAACAGTCCACAACCGGACCTCGAGCCGCAACGGGAAGCCCTAAACCTGAGCGAGAGCCCGAACTCGAGCACGAGCGTCAANNNNGCCAAACGTCGCACGCCGCGCCCTCCCTCCCCGCGCGCGTCGTCCCCGCGGTCGCCCCGCGCAGCGCCGCACGCGTCGCACGGGCCGCACGGGCCGCTCGCGGCGCGCGACGCGTCACACGGCGCGCACGTCAACGGCAATGCGAATGGCGTGAACGGTGCGGCGTTCAAGATCACTACCAGAGGTGACGCGAGCACAGGCGACCAGCAGCTGGTCGTGTCCATCGAGCTGAACGGCGTTACGTACGAGGGTGTGTTATTTCCGTCCCAGAGCGGGAACGGCCAGAACGGTCACAGGCAAATGGTTTCCTAA
- Protein Sequence
- MSLRRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHVTHDIEYRVREYMKMIQQQRELMRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNNNNNSPQPDLEPQREALNLSESPNSSTSVXXAKRRTPRPPSPRASSPRSPRAAPHASHGPHGPLAARDASHGAHVNGNANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_01438679;
- 80% Identity
- iTF_00970191;