Efla000684.1
Basic Information
- Insect
- Endotricha flammealis
- Gene Symbol
- retn
- Assembly
- GCA_905163395.1
- Location
- LR990870.1:9703973-9708838[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-21 3.8e-17 63.3 0.0 13 89 14 86 6 86 0.92 2 2 3.9 1.9e+04 -3.0 0.0 25 38 220 233 182 236 0.68
Sequence Information
- Coding Sequence
- ATGATGATCAACTGTATTGAAATCTGCTTACAAGATTTTAACAGAGGTACCCCAATAAACCGGCTCCCGATCATGGCCAAATCTGTTCTGGATTTGTATGAGTTGTATAACCTTGTCATTGCGCGAGGTGGTCTGGTCGAGGTTATCAACAAGAAGCTATGGCAAGAAATCATCAAAGGCCTCAGATTACCTTCATCCATCACATCTGCTGCATTCACATTAAGAACACAATATATGAAGTACTTATATGACTATGAGTGCGAGAAGAAGAATCTATCGACCCGTAGCGAACTGGATGCAGCTATAGAAGGAAACAAACGTGAAGGCAGACGCGCATCAGGACAGTATGATGCGCAGGCGGCACTCGCAATGCCGCCACTGGGTAGAGGAGTTCCGTCGTCTCTTGCGCAGCTTTCACAACACATGCAGCCTCTGTCGTTGTCTCTTGGTGGGGGTGTAGCAGGAGTGCCAAGGTTGCCTCCTCTCCCACCTCACGCTCCCCAACACATCTCCCAACACGATATAGAATATCGAGTTAGGGAGTACATGAAGATGATACAGCAACAAAGGGAGCTCATGAGGAATGGGTCAGAGTCTCCGCCAGGTGGTAATGGGCCGACGCCCATGATGTCACCCCGTGATGCCGCCGCCCTCAGCGCCATCGATGTCTCCCGACTGACCTTATGGTCGCTCTACAACAATAACAACAACAACAGCAGTCCCCAGCCAGACCTGGAGCCACAACGTGAGGCTTTAAATCTTAGTGAAAGCCCAAACTCTAGCACGAGTGGAGGCAAGCGCGAAGCATGCCGCTCGCCCCCACCGCCAGCGAAGCGTCGCACCACACGCCCCGAGTCACCCCGAGCGAGCCCGCCGCACACGCCGCTAGCCCCGCTCACGCACGCGCCGAGCGAACGGAGCACGCCGAACATGCCGCGAGCATGCATGCCACAAACTGTTAATGGAAATACGCCGAACGGCGTTAATGGAGCAGCGTTTAAAATTACTACAAGAGGTGACGCGACAACTGGCGATCAGCAACTCGTAGTCTCCATTGAACTAAACGGAGTCACATACGAAGGCGTGCTATTCCCATCTGGAAATGGTCAGAACGGACACAGGCAAATGGTGTCATAA
- Protein Sequence
- MMINCIEICLQDFNRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLGRGVPSSLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPQHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGGNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSSPQPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTTRPESPRASPPHTPLAPLTHAPSERSTPNMPRACMPQTVNGNTPNGVNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- -
- 80% Identity
- -