Hchr018404.2
Basic Information
- Insect
- Hemistola chrysoprasaria
- Gene Symbol
- retn
- Assembly
- GCA_947063395.1
- Location
- OX346726.1:9452046-9460016[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-20 1e-16 61.8 0.0 16 89 8 79 2 79 0.95 2 2 5.1 1.4e+04 -2.7 0.0 25 38 210 223 170 224 0.57
Sequence Information
- Coding Sequence
- ATGCAAAGCGGGAGTGGTGCAAAAGGCACTCCAATAAACCGGCTGCCGATAATGGCGAAGTCAGTGCTGGACCTCTACGAGCTGTACAATTTGGTAATAGCTCGGGGCGGCCTCGTCGAGGTTATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGACTCCGGCTGCCGTCTTCAATCACGTCTGCGGCCTTTACTTTACGCACGCAATACATGAAGTACCTATATGACTATGAATGTGAGAAGAAGAACCTGTCCACTCGCAGCGAGCTGGACGCTGCCATAGAAGGCAACAAGCGGGAAGGAAGACGCGCCTCCGGACAATACGACGCGCAGGCTGCTCTTGCTATGCCTTCGCTGAACCGCGGCGTGCCGGCGTCTCTAGCTCAGTTGTCGCAGCACATGCAGCCACTGTCGCTGTCCCTCGGTGGAGGAGTGCCGCGGCTACCTCCTCTACCTCCGCACGCGCCGCACATCTCTCAGCACGACATCGAGTATAGAGTCCGAGAGTACATGAAGATGATTCAGCAGCAACGGGAGTTGATGAGGAATGGTTCAGAATCCCCACCAAGTGCGACCAACGGCCCCACTCCGATGATGTCTCCCCGCGACGCGGCCGCGTTGAATGCCATCGACGTCTCCCGCCTCACCCTCTGGTCGCTCTATAACAATAACAACAACAGCCCGCAGCCTACCGACCTCGAACCGCAGCGAGAGGCGCTGAACCTGAGCGAGAGTCCGAACTCAATCACGAGCGGTGGCAAGCGCGAGGCGCAGGGTTGTcgctcgccgccgccgccggccaAGCGCCGCACGCCGCGCCCTCCCTCCCCCGCCTCCCCGCCGGCCCCGGCGCCCGCGCCGCGACAACCCTGCGTGCCTCCACAACTTAACGGCACGCCCACCAACGGTGTCAATGGAGCAGCTTTCAAAATCACCACACGAGGTGACGCAAACACAGGTGACCAGCAGCTCGTTGTTTCGATAGAACTAAACGGCGTGACATACGAAGGCGTCCTATTCCCCTCACAAAACGGCAATGGTCAAAACGGCCACCGGCAGATGGTATCTTAA
- Protein Sequence
- MQSGSGAKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPSATNGPTPMMSPRDAAALNAIDVSRLTLWSLYNNNNNSPQPTDLEPQREALNLSESPNSITSGGKREAQGCRSPPPPAKRRTPRPPSPASPPAPAPAPRQPCVPPQLNGTPTNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00723754;
- 80% Identity
- -