Afla018592.2
Basic Information
- Insect
- Achlya flavicornis
- Gene Symbol
- retn
- Assembly
- GCA_947623365.1
- Location
- OX392484.1:9371085-9379191[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-20 1.2e-16 61.1 0.0 16 89 14 85 9 85 0.95 2 2 5.1 1.2e+04 -2.9 0.0 25 38 218 231 179 232 0.58
Sequence Information
- Coding Sequence
- ATGGCCACAGATCGTCCCTGTCACATTGGTTCATACATCAAAGGAACCCCAATAAACCGGCTGCCAATAATGGCTAAGTCTGTGTTGGACTTATACGAGCTGTACAACTTGGTGATCGCGCGGGGCGGCCTGGTCGAGGTGATCAACAAGAAGTTGTGGCAGGAGATCATTAAGGGACTCCGGCTGCCGTCGTCCATCACGTCTGCTGCCTTCACACTACGCACACAATACATGAAGTACCTATACGACTACGAGTGTGAAAAGAAGAACTTGTCTACTCGGAGTGAGTTGGACGCCGCCATCGAAGGCAACAAGCGGGAAGGAAGGCGAGCCTCCGGACAATATGATGCGCAAGCGGCCCTCGCTATGCCGCCGCTGAACCGAGGCGTACCGGCTTCGTTGGCACAGTTGTCACAGCACATGCAGCCACTGTCGCTATCCCTCGGCGGAGGAGTGGGTGGCGTGCCTCGCTTGCCGCCGCTACCTCCTCACGCACCTCATATCTCGCCTCACGATCTGGAGTACCGCGTCCGGGAGTACATGAAGATGATCCAGCAGCAGCGGGAGTTGATGAGGAATGGGTCAGAATCTCCTCCGAACTCGAATGGGCCAGCTCCGATGATGTCCCCGCGCGACGCGGCCGCACTCAGCGCCATCGACGTGTCGCGCCTCACGCTCTGGTCGCTCTACAACAACAACAACAACAGCCCGCAGCCAGACCTTGAGCCGCAACGTGAGGCGCTGAATCTGAGCGAGAGTCCGAACTCGTTGACGAGCGGCGGTGGGGGCGGAGGGGGCGGCAAGCGTGAAGCGTGCCGCTCGCCCCCTCCCCCCGCCAAGCGGCGCACCCCGCGGCCCGCGTCGCCGCGCTCGCCGCGCTCGCCGCCGCGCCTGCGCCTGCCCACGCCGCAGCCGCACTCCAACCCGATGTCGCACCCGCTCTCGCACCCGCACCCGCACTCGCAGCCGCACCTCAACGGAACCAATGGCACCAATGGAGCAGCTTTCAAGATTACCACTAGAGGCGATGCAACAACAGGCGATCAACAGCTAGTCGTCTCAATAGAATTAAACGGTGTTACGTACGAAGGCGTACTCTTCCCCTCACAAAACGGTAACGGTCAAAACGGTCACAGGCAAATGGTATCTTAA
- Protein Sequence
- MATDRPCHIGSYIKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISPHDLEYRVREYMKMIQQQRELMRNGSESPPNSNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSLTSGGGGGGGGKREACRSPPPPAKRRTPRPASPRSPRSPPRLRLPTPQPHSNPMSHPLSHPHPHSQPHLNGTNGTNGAAFKITTRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_01436800;
- 80% Identity
- -