Pdid009261.1
Basic Information
- Insect
- Philaethria dido
- Gene Symbol
- retn
- Assembly
- GCA_033558755.1
- Location
- JAKGSA010000433.1:769220-774701[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-17 1.3e-13 51.5 0.1 29 89 4 62 1 62 0.93 2 2 3.7 9.6e+03 -2.6 0.0 25 38 189 202 153 203 0.55
Sequence Information
- Coding Sequence
- ATGGCGAAGTCGGTTTTGGACTTATACGAACTTTACAACCTGGTGATAGCTCGTGGCGGCCTCGTGGAAGTCATCAACAAGAAACTCTGGCAAGAGATCATTAAAGGTCTGCGACTCCCCTCCTCCATCACTTCAGCCGCATTCACTTTACGCACACAatacatgaaatatttatatgattacgAGTGCGAGAAAAAGAACTTGTCGACTAGGAGCGAGTTGGACGCCGCCATCGAGGGCAACAAGCGTGAGGGACGTCGCGCCTCTGGACAGTACGATGCGCAGGCCGCCTTGGCCATGCCACCTCTAAACAGAGTGCCAGCGTCCCTCGCGCAGTTGTCCCAGCACATGCAGCCGCTGTCCCTGTCGCTAGGGGGCGGCGTGGCGGGCGTGCCGCGTCTGCCGCCGCTGCCGCCGCACGCGCCGCACATCGCGCAACACGACATCGAATATAGAGTTAGGGAGTACATGAAAATGATACAGCAGCAACGCGAGATGATTAGAAATGGATCGGAGTCTCCACCAGGAGCTCCTATGGTGTCGCCTAGAGATGCAGCGCTGTCAGCCATCGACGTGTCGCGACTTACTCTGTGGTCACTctataataacaacaataatagCCCACAACCAGATTTTGAGGCCTTAAATCTAAGCGAGAGTCCCAACTCCACACTAAGCGGCGGCAAGCGCGAGGCGTGCCGCTCCCCTCCCCCGCCGGCCAAGCGGCGCACCCCGCGGCCGCCCTCCCCGTCGGGGGGAGCCGGCGCGCGCGCTCCCTCCTCCCCGCACTCCCCACACTCCTCGCCTCCCCGCTCACACGCACACATGAATGGCAGCGCCAACAGTAATGGGGTACATGGTGCCGCCTTCAAAATTACTACACGAGGCGACGCAAACACCGGCGACCAACAACTCGTAGTGTCTATCGAACTAAACGGCGTAACGTACGAAGGCGTTCTGTTCCCGTCACAGAGCGGCAACGGTCAGAACGGGCATCGGCAGATGGTGTCTTAG
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHIAQHDIEYRVREYMKMIQQQREMIRNGSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDFEALNLSESPNSTLSGGKREACRSPPPPAKRRTPRPPSPSGGAGARAPSSPHSPHSSPPRSHAHMNGSANSNGVHGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00642129;
- 80% Identity
- -