Tacr016305.1
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- retn
- Assembly
- GCA_963506565.1
- Location
- OY735887.1:8126804-8132888[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 2.4e-16 60.4 0.0 17 89 47 117 33 117 0.94 2 2 9.1 1.9e+04 -3.3 0.0 25 38 249 262 213 263 0.67
Sequence Information
- Coding Sequence
- ATGTCGCCAGAAGACTCAATCTTGTGCGGGCTTCTCACTACCTCAAAAGGAATGCCCAGAGTTCTCCCAGGATTTCAATCCAACTGGCGTTTCTACTACCACGATCATGCAATAACATCAAGTCCTTTCATTGTTGCAGGAACGCCAATAAATCGGCTGCCGATCATGGCCAAGTCTGTGCTGGACCTGTACGAGCTGTACAACTTGGTGATCGCACGCGGAGGTCTCGTCGAGGTCATCAACAAGAAACTTTGGCAGGAGATCATTAAGGGACTGCGGCTGCCTTCGTCCATCACGTCTGCTGCCTTCACTTTACGTACACAATACATGAAATACCTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCCACTCGGAGCGAGCTGGACGCGGCCATTGAAGGCAACAAGCGCGAAGGGCGCAGAGCCTCCGGCCAGTACGACGCACAGGCGGCTCTCGCTATGCCGCCGCTGAACCGCGGAGTGCCTGCTTCTCTCGCGCAGCTCACCCAGCACATGCAGCCCCTCTCCCTGTCGCTGGGGGGCGGCGTGGCCGGAGTGCCTCGCCTGCCTCCCCTGCCGCCGCACGCGCCGCACCTCTCGCAACACGACATTGAGTACCGGGTCCGGGAGTACATGAAGATGATCCAGCAACAGAGGGAGCTGATGAGGAATGGGTCCGAGTCGCCGCCCGGCAACGGGCCCGCTCCGATGATGTCCCCCCGGGACGCGGCCGCGCTCAGTGCCATCGACGTCTCCCGCCTCACCCTGTGGTCTCtctacaacaacaacaacaacagccCGCAGCCGGACCTCGAGCCGCAACGAGAGGCCTTGAACCTCAGTGAGAGCCCCAACTCAAGTCTCCCGGGCGGTATCAAGCGCGAGGCGTGCCGCTCCCCCCCGCCGCCCGCCAAGCGGCGTACCCCGCACCCGCCCTCGCCCCGCGCACCCTCACCACCCCGCCCCGCGGCCCTGCCGGCGCATCACACGCAACACAACGGCGGTAACAACGCCAATGGGGTGAATGGGGCTGCGTTTAAAATTACTACTAGAGGTGACGCAGCGACAGGCGACCAGCAACTAGTAGTGTCAATAGAACTGAACGGAGTGACGTACGAAGGCGTTCTCTTCCCGTCGAGTGGCAACGGACAGAACGGACACAGGCAAATGGTCTCCTAA
- Protein Sequence
- MSPEDSILCGLLTTSKGMPRVLPGFQSNWRFYYHDHAITSSPFIVAGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLTQHMQPLSLSLGGGVAGVPRLPPLPPHAPHLSQHDIEYRVREYMKMIQQQRELMRNGSESPPGNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLPGGIKREACRSPPPPAKRRTPHPPSPRAPSPPRPAALPAHHTQHNGGNNANGVNGAAFKITTRGDAATGDQQLVVSIELNGVTYEGVLFPSSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00654018;
- 80% Identity
- -