Paur021810.1
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- retn
- Assembly
- GCA_963584085.1
- Location
- OY757270.1:4925284-4931012[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-20 3.2e-16 60.3 0.0 14 89 5 78 1 78 0.93 2 2 4.8 1.8e+04 -2.9 0.0 25 38 211 224 173 226 0.66
Sequence Information
- Coding Sequence
- ATGAGCAATATAAAAGCTGacaGAACACCAATCAACCGGTTGCCCATCATGGCCAAGTCAGTCCTTGACCTGTACGAGCTGTACAATCTGGTGATAGCCCGGGGAGGTCTTGTCGAGGTGATCAACAAGAAACTGTGGCAGGAGATCATCAAGGGCTTGAGGCTGCCGTCGTCCATCACGTCTGCTGCTTTCACTTTGAGGACACAATACATGAAGTACTTATACGACTATGAGTGCGAGAAGAAGAACCTTTCTACAAGGAGTGAGCTGGACGCGGCTATAGAAGGGAACAAGAGGGAAGGTCGACGCGCGTCCGGACAGTACGATGCGCAGGCGGCGCTAGCGATGCCGCCGCTAAGCCGAGGTGTTCCCGCGTCGCTTGCGCAGCTCTCGCAACACATGCAGCCGCTCTCGCTCTCTCTCGGAGGGGGGGTGGGGGGCGTCCCCCGCTTGCCCCCGCTACCGCCGCATGCGCCGCATATATCGCAGCACGATATTGAATACCGAGTGAGGGAGTACATGAAGATGATTCAGCAGCAGAGGGAGCTGATGAGGAatgGTTCAGAATCCCCTCCCGGCTCGAACGGGCCAGCGCCCATGATGTCCCCGCGCGACGCCGCCGCTCTCAGCGCTATCGACGTCTCCCGCCTCACTCTGTGGTCCctctacaacaacaacaacaatagcCCGCAACCAGAGATCGAGCCGCAGCGCGAAGCCCTAAATCTAAGCGAGAGTCCAAACTCGACGCTCAGCGGAGGCAAGCGCGAGGCCTGCCGTTCCCCCCCGCCCCCCGCAAAGCGCCGCACCCCGCGCCCGCCGTCACCGCGTGTCGCGACCCCTCCGCGCTCCACCCCCCCTCAGGTTAACGGCAGCCCGCCGACTAACGGCGTGAATGGAGCAGCTTTTAAGATTACTACTCGAGgtgACGCAAGCACAGGCGACCAGCAACTAGTCGTCTCCATAGAACTAAATGGCGTCACATACGAAGGCGTGCTATTTCCATCACAGAACGGCAACGGACAAAACGGCCACAGGCAGATGGTATCTTAA
- Protein Sequence
- MSNIKADRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPEIEPQREALNLSESPNSTLSGGKREACRSPPPPAKRRTPRPPSPRVATPPRSTPPQVNGSPPTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723754;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -